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Rare variants at KCNJ2 are associated with LDL-cholesterol levels in a cross-population study
Rare variants at KCNJ2 are associated with LDL-cholesterol levels in a cross-population study
Leveraging whole genome sequencing data of 1751 individuals from the UK and 2587 Qatari subjects, we suggest here an assoc...
Structure and transcription of integrated HPV DNA in vulvar carcinomas
Structure and transcription of integrated HPV DNA in vulvar carcinomas
HPV infections are associated with a fraction of vulvar cancers. Through hybridization capture and DNA sequencing, HPV DNA...
An efficient molecular genetic testing strategy for incontinentia pigmenti based on single-tube long fragment read sequencing
An efficient molecular genetic testing strategy for incontinentia pigmenti based on single-tube long fragment read sequencing
Incontinentia pigmenti (IP) is a rare X-linked dominant neuroectodermal dysplasia that primarily affects females. The only...
Analysis of cell free DNA to predict outcome to bevacizumab therapy in colorectal cancer patients
Analysis of cell free DNA to predict outcome to bevacizumab therapy in colorectal cancer patients
To predict outcome to combination bevacizumab (BVZ) therapy, we employed cell-free DNA (cfDNA) to determine chromosomal in...
Structure-based network analysis predicts pathogenic variants in human proteins associated with inherited retinal disease
Structure-based network analysis predicts pathogenic variants in human proteins associated with inherited retinal disease
Advances in gene sequencing technologies have accelerated the identification of genetic variants, but better tools are nee...
Evaluating the utility of multi-gene, multi-disease population-based panel testing accounting for uncertainty in penetrance estimates
Evaluating the utility of multi-gene, multi-disease population-based panel testing accounting for uncertainty in penetrance estimates
Panel germline testing allows for the efficient detection of deleterious variants for multiple conditions, but the benefit...
Reply to: Pitfalls in the genetic testing of the OPN1LW-OPN1MW gene cluster in human subjects
Reply to: Pitfalls in the genetic testing of the OPN1LW-OPN1MW gene cluster in human subjects
replying to Wissinger, B. npj Genomic Medicine https://doi.org/10.1038/s41525-024-00406-y (2024)We re...
Pitfalls in the genetic testing of the OPN1LW-OPN1MW gene cluster in human subjects
Pitfalls in the genetic testing of the OPN1LW-OPN1MW gene cluster in human subjects
arising from Haer-Wigman, L. et al. npj Genomic Medicine https://doi.org/10.1038/s41525-022-00334-9 (...
Consensus reporting guidelines to address gaps in descriptions of ultra-rare genetic conditions
Consensus reporting guidelines to address gaps in descriptions of ultra-rare genetic conditions
Genome-wide sequencing and genetic matchmaker services are propelling a new era of genotype-driven ascertainment of novel ...
Strategies to improve implementation of cascade testing in hereditary cancer syndromes: a systematic review
Strategies to improve implementation of cascade testing in hereditary cancer syndromes: a systematic review
Hereditary cancer syndromes constitute approximately 10% of all cancers. Cascade testing involves testing of at-risk relat...
Future implications of polygenic risk scores for life insurance underwriting
Tiller, J., Otlowski, M. & Lacaze, P. Should Australia ban the use of genetic test results in life insurance? Front. P...
Advancing access to genome sequencing for rare genetic disorders: recent progress and call to action
Despite these advancements, only a small fraction of the population is covered for GS, and such testing is largely inacces...
Genomic and clinical characterization of a familial GIST kindred intolerant to imatinib
Genomic and clinical characterization of a familial GIST kindred intolerant to imatinib
Familial gastrointestinal stromal tumors (GIST) are rare. We present a kindred with multiple family members affected with ...
Expanding the clinical spectrum of biglycan-related Meester-Loeys syndrome
Expanding the clinical spectrum of biglycan-related Meester-Loeys syndrome
Pathogenic loss-of-function variants in BGN, an X-linked gene encoding biglycan, are associated with Meester-Loeys syndrom...
Genomic analysis of 116 autism families strengthens known risk genes and highlights promising candidates
Genomic analysis of 116 autism families strengthens known risk genes and highlights promising candidates
Autism spectrum disorder (ASD) is a complex neurodevelopmental condition with a strong genetic component in which rare var...
Genomes in clinical care
Genomes in clinical care
In the era of precision medicine, genome sequencing (GS) has become more affordable and the importance of genomics and mul...
Genome-wide association analyses of ovarian cancer patients undergoing primary debulking surgery identify candidate genes for residual disease
Genome-wide association analyses of ovarian cancer patients undergoing primary debulking surgery identify candidate genes for residual disease
Survival from ovarian cancer depends on the resection status after primary surgery. We performed genome-wide association a...
Bi-allelic variants in CELSR3 are implicated in central nervous system and urinary tract anomalies
Bi-allelic variants in CELSR3 are implicated in central nervous system and urinary tract anomalies
CELSR3 codes for a planar cell polarity protein. We describe twelve affected individuals from eleven independent families ...
Rapid genomic sequencing for genetic disease diagnosis and therapy in intensive care units: a review
Rapid genomic sequencing for genetic disease diagnosis and therapy in intensive care units: a review
Single locus (Mendelian) diseases are a leading cause of childhood hospitalization, intensive care unit (ICU) admission, m...
DNA and RNA base editors can correct the majority of pathogenic single nucleotide variants
DNA and RNA base editors can correct the majority of pathogenic single nucleotide variants
The majority of human genetic diseases are caused by single nucleotide variants (SNVs) in the genome sequence. Excitingly,...
Evidence review and considerations for use of first line genome sequencing to diagnose rare genetic disorders
Evidence review and considerations for use of first line genome sequencing to diagnose rare genetic disorders
Early use of genome sequencing (GS) in the diagnostic odyssey can reduce suffering and improve care, but questions remain ...
A call for increased inclusivity and global representation in pharmacogenetic testing
Commercial pharmacogenetic testing panels capture a fraction of the genetic variation underlying medication metabolism and...
Single cell-transcriptomic analysis informs the lncRNA landscape in metastatic castration resistant prostate cancer
Single cell-transcriptomic analysis informs the lncRNA landscape in metastatic castration resistant prostate cancer
Metastatic castration-resistant prostate cancer (mCRPC) is a lethal form of prostate cancer. Although long-noncoding RNAs ...
Assessing the efficacy of target adaptive sampling long-read sequencing through hereditary cancer patient genomes
Assessing the efficacy of target adaptive sampling long-read sequencing through hereditary cancer patient genomes
Innovations in sequencing technology have led to the discovery of novel mutations that cause inherited diseases. However, ...
Clinical application of next generation sequencing for Mendelian disease diagnosis in the Iranian population
Clinical application of next generation sequencing for Mendelian disease diagnosis in the Iranian population
Next-generation sequencing (NGS) has been proven to be one of the most powerful diagnostic tools for rare Mendelian disord...
Eliciting parental preferences and values for the return of additional findings from genomic sequencing
Eliciting parental preferences and values for the return of additional findings from genomic sequencing
Health economic evidence is needed to inform the design of high-value and cost-effective processes for returning genomic r...
Germline mutations of 4567 patients with hereditary breast-ovarian cancer spectrum in Thailand
Germline mutations of 4567 patients with hereditary breast-ovarian cancer spectrum in Thailand
Multi-gene panel testing has led to the detection of pathogenic/likely pathogenic (P/LP) variants in many cancer susceptib...
A cost-effective sequencing method for genetic studies combining high-depth whole exome and low-depth whole genome
A cost-effective sequencing method for genetic studies combining high-depth whole exome and low-depth whole genome
Whole genome sequencing (WGS) at high-depth (30X) allows the accurate discovery of variants in the coding and non-coding D...
Divergent immune microenvironments in two tumor nodules from a patient with mismatch repair-deficient prostate cancer
Divergent immune microenvironments in two tumor nodules from a patient with mismatch repair-deficient prostate cancer
Patients with prostate cancer (PC) generally do not respond favorably to immune checkpoint inhibitors, which may be due to...
Whole genome sequencing enables new genetic diagnosis for inherited retinal diseases by identifying pathogenic variants
Whole genome sequencing enables new genetic diagnosis for inherited retinal diseases by identifying pathogenic variants
Inherited retinal diseases (IRDs) are a group of common primary retinal degenerative disorders. Conventional genetic testi...
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