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Deciphering crucial genes in multiple sclerosis pathogenesis and drug repurposing: A systems biology approach
This study employed systems biology and high-throughput technologies to analyze complex molecular components of MS pathoph...
Global proteomic analysis reveals lysine succinylation contributes to the pathogenesis of aortic aneurysm and dissection
KeywordsPosttranslational modificationLysine succinylationAortic aneurysmAortic dissectionVascular smooth muscle cellsData...
Bovine extracellular matrix proteins and potential role in meat quality: First in silico Bos taurus compendium
Available online 27 March 2023, 104891Author links open overlay panel, , , Highlights•The putative Bos taurus matrisome ha...
The ovaries of ivermectin-resistant Rhipicephalus microplus strains display proteomic adaptations involving the induction of xenobiotic detoxification and structural remodeling mechanisms
Available online 29 March 2023, 104892Author links open overlay panel, , , , , , , Highlights•Translation, transportation,...
An integrated multi-level analysis reveals learning-memory deficits and synaptic dysfunction in the rat model exposure to austere environment
Austere environment existing in tank, submarine and vessel has many risk factors including high temperature and humidity, ...
Control of TurboID-dependent biotinylation intensity in proximity ligation screens
KeywordsBiotinylationProteomicsProximity ligation screensProtein-protein interactionsAbbreviationsCNPY3Canopy FGF Signalin...
Proteomic characterisation of polyethylene terephthalate and monomer degradation by Ideonella sakaiensis
Keywordsβ-OxidationMHETasePETasePlastic degraderPolyethylene terephthalateProteomicsData availabilityThe mass spectrometry...
Proteomic analysis of liver tissue reveals Aeromonas hydrophila infection mediated modulation of host metabolic pathways in Labeo rohita
aarsalanine–tRNA ligase OSatp2b1calcium-transporting ATPaseatp6v1aH(+)-transporting two-sector ATPaseatp6vocV-type proton ...
Proteomic analysis reveals the non-coding small RNA Qrr5 influences autoaggregation and growth competition in Vibrio parahaemolyticus
Available online 12 March 2023, 104866Author links open overlay panel, , , , , , , , , , , , , Highlights•Vibrio parahaemo...
The triticale mature pollen and stigma proteomes – assembling the proteins for a productive encounter
Volume 278, 30 April 2023, 104867Author links open overlay panel, , , , , , Highlights•Triticeae (wheat, barley, rye, trit...
Biochemical network analysis of protein-protein interactions to follow-up T1 bladder cancer patients
KeywordsBladder cancerUrine proteomicsMass spectrometryNeutrophil extracellular traps, myeloperoxidase (MPO)Cubilin (CUBN)...
The use of data independent acquisition based proteomic analysis and machine learning to reveal potential biomarkers for autism spectrum disorder
Autism spectrum disorder (ASD) is a complex neurological developmental disorder in children, and is associated with social...
Towards the discovery of goat meat quality biomarkers using label-free proteomics
This study aimed to identify for the first time protein biomarkers of meat quality traits from Longissimus thoracis (LT) m...
Post-mortem muscle proteome of crossbred bulls and steers: Relationships with carcass and meat quality
This study investigated the skeletal muscle proteome of crossbred bulls and steers with the aim of explaining the differen...
Proteomic and phosphoproteomic analyses of Jurkat T-cell treated with 2′3′ cGAMP reveals various signaling axes impacted by cyclic dinucleotides
Keywords2′3′-cGAMPPhosphoproteomicsPost-translational modification (PTM)KinasesData availabilityRaw LC-MS/MS data for this...
Label-free proteomic analysis and functional analysis in patients with intrauterine adhesion
Intrauterine adhesion (IUA) is one of the principal causes of secondary infertility in women of reproductive age, which se...
Comparative proteome profiling of fusarium chlamydosporum and elucidation of pigment biosynthetic pathway under nitrogen stress
Available online 20 February 2023, 104851Author links open overlay panel, Highlights•Comparison of the proteome profile of...
To explore the regulatory effect of Buyang Huanwu Decoction on cerebral infarction based on quantitative proteomics
Buyang Huanwu Decoction (BYHW) contains chemical components such as ligustrazine, oxypaeoniflora, chlorogenic acid, and ot...
Quantitative proteomics reveals reduction in central carbon and energy metabolisms contributes to gentamicin resistance in Staphylococcus aureus
The emergence of antibiotic resistance greatly increases the difficulty of treating bacterial infections. In order to deve...
Proteome analysis reveals novel serum biomarkers for Henoch-Schönlein purpura in Chinese children
KeywordsEarly diagnosisHenoch-Schönlein purpuraMass spectrometrySerum biomarkerAbbreviationsHSPHenoch-Schönlein purpuraHSP...
DiagnoMass: A proteomics hub for pinpointing discriminative spectral clusters
MotivationThere are several well-established paradigms for identifying and pinpointing discriminative peptides/proteins us...
Identification of PRTN3 as a novel biomarker for the diagnosis of early gastric cance
Gastric cancer (GC) remains one of the most common types of cancer worldwide and has a high mortality rate. However, tools...
Differences in aqueous humor protein profiles in patients with proliferative diabetic retinopathy before and after conbercept treatment
KeywordsProliferative diabetic retinopathyProteomicsConberceptLC-MS/MSData availabilityThe datasets generated during the c...
Spin column-based peptide fractionation alternatives for streamlined tandem mass tag (SL-TMT) sample processing
Fractionation is essential to achieving deep proteome coverage for sample multiplexing experiments where currently up to 1...
Perturbed post-translational modification (PTM) network atlas of collagen I during stent-induced neointima formation
KeywordsCollagen-IPost-translational modificationsProlyl-hydroxylationO-glycosylationMass-spectrometryMicroheterogeneityEC...
Molecular insights into quality and authentication of sheep meat from proteomics and metabolomics
Sheep meat (encompassing lamb, hogget and mutton) is an important source of animal protein in many countries, with a uniqu...
Overview of omics applications in elucidating the underlying mechanisms of biochemical and biological factors associated with meat safety and nutrition
Volume 276, 30 March 2023, 104840Author links open overlay panel, , , , , Highlights•Meat-omics is a trending area in the ...
Study of emerging chicken meat quality defects using OMICs: What do we know?
Volume 276, 30 March 2023, 104837Author links open overlay panel, , , , Highlights•The etiology of broiler myopathies has ...
Integrated transcriptome and proteome analysis provides insights into the mechanism of cytoplasmic male sterility (CMS) in tobacco (Nicotiana tabacum L.)
KeywordsNicotiana tabacum L.Cytoplasmic male sterilityTranscriptomicsProteomicsData availabilityAll data generated or anal...
Identification of cancer protein biomarker based on cell specific peptide and its potential role in predicting tumor metastasis
The identification of tumor related membrane protein is important for both cancer diagnosis and targeted therapy. Currentl...
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