Formation and retrieval of cell assemblies in a biologically realistic spiking neural network model of area CA3 in the mouse hippocampus

Ascoli, G. A., & Wheeler, D. W. (2016). In search of a periodic table of the neurons: Axonal-dendritic circuitry as the organizing principle. Bioessays, 38(10), 969–976.

Article  PubMed  PubMed Central  Google Scholar 

Ascoli, G. A., Brown, K. M., Calixto, E., Card, J. P., Galvan, E. J., Perez-Rosello, T., et al. (2009). Quantitative morphometry of Electrophysiologically identified CA3b interneurons reveals robust local geometry and distinct cell classes. The Journal of Comparative Neurology, 515(6), 677–695.

Article  PubMed  PubMed Central  Google Scholar 

Attili, S. M., Silva, M. F. M., Nguyen, T., & vi, Ascoli, G. A. (2019). Cell numbers, distribution, shape, and regional variation throughout the murine hippocampal formation from the adult brain Allen Reference Atlas. Brain Struct Funct, 224(8), 2883–2897.

Article  PubMed  PubMed Central  Google Scholar 

Attili, S. M., Moradi, K., Wheeler, D. W., & Ascoli, G. A. (2022). Quantification of neuron types in the rodent hippocampal formation by data mining and numerical optimization. European Journal of Neuroscience, 55(7), 1724–1741.

Article  PubMed  CAS  Google Scholar 

Belchior, H., Lopes-dos-Santos, V., Tort, A. B., & Ribeiro, S. (2014). Increase in hippocampal theta oscillations during spatial decision making. Hippocampus, 24(6), 693–702.

Article  PubMed  PubMed Central  Google Scholar 

Bennett, M. R., Gibson, W. G., & Robinson, J. (1997). Dynamics of the CA3 pyramidial neuron autoassociative memory network in the hippocampus. Philosophical Transactions of the Royal Society of London Series B: Biological Sciences, 343(1304), 167–187.

Google Scholar 

Bezaire, M. J., Raikov, I., Burk, K., Vyas, D., & Soltesz, I. (2016). Interneuronal mechanisms of hippocampal theta oscillations in a full-scale model of the rodent CA1 circuit. eLife, 5, e18566.

Article  PubMed  PubMed Central  Google Scholar 

Bi, G. &, Poo, M. (1998). Synaptic modifications in cultured hippocampal neurons: Dependence on spike timing, synaptic strength, and postsynaptic cell type. The Journal of Neuroscience, 18(24), 10464–10472.

Butcher, J. C. (1996). A history of Runge-Kutta methods. Applied Numerical Mathematics, 20(3), 247–260.

Article  Google Scholar 

Buzsáki, G. (2010). Neural syntax: Cell assemblies, synapsembles and readers. Neuron, 68(3), 362–385.

Article  PubMed  PubMed Central  Google Scholar 

Buzsáki, G. (2015). Hippocampal sharp wave-ripple: A cognitive biomarker for episodic memory and planning. Hippocampus, 25(10), 1073–1188.

Article  PubMed  PubMed Central  Google Scholar 

Buzsáki, G. (2019). The brain from Inside Out (p. 464). Oxford University Press.

Buzsáki, G., & Mizuseki, K. (2014). The log-dynamic brain: How skewed distributions affect network operations. Nature Reviews Neuroscience, 15(4), 264–278.

Article  PubMed  PubMed Central  Google Scholar 

Carrillo-Reid, L., Han, S., Yang, W., Akrouh, A., & Yuste, R. (2019). Controlling visually guided Behavior by Holographic Recalling of Cortical Ensembles. Cell, 178(2), 447–457e5.

Article  PubMed  PubMed Central  CAS  Google Scholar 

Cunningham, J. P., & Yu, B. M. (2014). Dimensionality reduction for large-scale neural recordings. Nature Neuroscience, 17(11), 1500–1509.

Article  PubMed  PubMed Central  CAS  Google Scholar 

de Almeida, L., Idiart, M., & Lisman, J. E. (2007). Memory retrieval time and memory capacity of the CA3 network: Role of gamma frequency oscillations. Learning & Memory, 14(11), 795–806.

Article  Google Scholar 

Debanne, D., Gähwiler, B. H., & Thompson, S. M. (1998). Long-term synaptic plasticity between pairs of individual CA3 pyramidal cells in rat hippocampal slice cultures. Journal of Physiology, 507(Pt 1), 237–247.

Article  PubMed  PubMed Central  CAS  Google Scholar 

Ding, L., Chen, H., Diamantaki, M., Coletta, S., Preston-Ferrer, P., & Burgalossi, A. (2020). Structural correlates of CA2 and CA3 pyramidal cell activity in freely-moving mice. Journal of Neuroscience, 40(30), 5797–5806.

Article  PubMed  CAS  Google Scholar 

Dragoi, G., & Tonegawa, S. (2011). Preplay of future place cell sequences by hippocampal cellular assemblies. Nature, 469(7330), 397–401.

Article  PubMed  CAS  Google Scholar 

Eichenbaum, H.(2004). Hippocampus: Cognitive processes and neural representations that underlie declarative memory. Neuron, 44(1), 109–120.

Article  PubMed  CAS  Google Scholar 

Farooq, U., Sibille, J., Liu, K., & Dragoi, G. (2019). Strengthened temporal coordination within pre-existing sequential cell assemblies supports Trajectory Replay. Neuron, 103(4), 719–733e7.

Article  PubMed  PubMed Central  CAS  Google Scholar 

Feldman, D. E. (2012). The spike timing dependence of plasticity. Neuron, 75(4), 556–571.

Article  PubMed  PubMed Central  CAS  Google Scholar 

Fuentealba, P., Begum, R., Capogna, M., Jinno, S., Márton, L. F., Csicsvari, J., et al. (2008). Ivy cells: A Population of nitric-Oxide-Producing, slow-spiking GABAergic neurons and their involvement in hippocampal network activity. Neuron, 57(6), 917–929.

Article  PubMed  PubMed Central  CAS  Google Scholar 

Gastaldi, C., Schwalger, T., Falco, E. D., Quiroga, R. Q., & Gerstner, W. (2021). When shared concept cells support associations: Theory of overlapping memory engrams. PLOS Computational Biology, 17(12), e1009691.

Article  PubMed  PubMed Central  CAS  Google Scholar 

González-Rueda, A., Pedrosa, V., Feord, R. C., Clopath, C., & Paulsen, O. (2018). Activity-dependent downscaling of Subthreshold Synaptic Inputs during slow-Wave-Sleep-like activity in vivo. Neuron, 97(6), 1244–1252e5.

Article  PubMed  PubMed Central  Google Scholar 

Guzman, S. J., Schlögl, A., Frotscher, M., & Jonas, P. (2016). Synaptic mechanisms of pattern completion in the hippocampal CA3 network. Science, 353(6304), 1117–1123.

Article  PubMed  CAS  Google Scholar 

Guzman, S. J., Schlögl, A., Espinoza, C., Zhang, X., Suter, B. A., & Jonas, P. (2021). How connectivity rules and synaptic properties shape the efficacy of pattern separation in the entorhinal cortex–dentate gyrus–CA3 network. Nat Comput Sci, 1(12), 830–842.

Article  PubMed  Google Scholar 

Hasselmo, M. E., & Wyble, B. P. (1997). Free recall and recognition in a network model of the hippocampus: Simulating effects of scopolamine on human memory function. Behavioural Brain Research, 89(1), 1–34.

Article  PubMed  CAS  Google Scholar 

Hasselmo, M., Schnell, E., & Barkai, E. (1995). Dynamics of learning and recall at excitatory recurrent synapses and cholinergic modulation in rat hippocampal region CA3. Journal of Neuroscience, 15(7), 5249–5262.

Article  PubMed  CAS  Google Scholar 

Hebb, D. O. (1949). The Organization of Behavior. Wiley.

Hemond, P., Epstein, D., Boley, A., Migliore, M., Ascoli, G. A., & Jaffe, D. B. (2008). Distinct classes of pyramidal cells exhibit mutually exclusive firing patterns in hippocampal area CA3b. Hippocampus, 18(4), 411–424.

Article  PubMed  PubMed Central  Google Scholar 

Hemond, P., Migliore, M., Ascoli, G. A., & Jaffe, D. B. (2009). The membrane response of hippocampal CA3b pyramidal neurons near rest: Heterogeneity of passive properties and the contribution of hyperpolarization-activated currents. Neuroscience, 160(2), 359–370.

Article  PubMed  CAS  Google Scholar 

Hummos, A., Franklin, C. C., & Nair, S. S. (2014). Intrinsic mechanisms stabilize encoding and retrieval circuits differentially in a hippocampal network model. Hippocampus, 24(12), 1430–1448.

Article  PubMed  PubMed Central 

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