The impact of filamentous plant pathogens on the host microbiota

Trivedi P, Leach JE, Tringe SG, Sa T, Singh BK. Plant–microbiome interactions: from community assembly to plant health. Nat Rev Microbiol. 2020;18(11):607–21.

Article  CAS  PubMed  Google Scholar 

Durán P, Thiergart T, Garrido-Oter R, Agler M, Kemen E, Schulze-Lefert P, et al. Microbial interkingdom interactions in roots promote Arabidopsis survival. Cell. 2018;175(4):973-983. e14.

Article  PubMed  PubMed Central  Google Scholar 

Sharon O, Kagan-Trushina N, Sharon A. Wheat fungal endophyte communities are inseparable from the host and influence plant development. Turgeon BG, editor. mBio. 2023;22:e02533-23.

Google Scholar 

Vorholt JA, Vogel C, Carlström CI, Müller DB. Establishing causality: opportunities of synthetic communities for plant microbiome research. Cell Host Microbe. 2017;22(2):142–55.

Article  CAS  PubMed  Google Scholar 

Coleman-Derr D, Desgarennes D, Fonseca-Garcia C, Gross S, Clingenpeel S, Woyke T, et al. Plant compartment and biogeography affect microbiome composition in cultivated and native Agave species. New Phytol. 2016;209(2):798–811.

Article  CAS  PubMed  Google Scholar 

Özkurt E, Hassani MA, Sesiz U, Künzel S, Dagan T, Özkan H, et al. Seed-derived microbial colonization of wild emmer and domesticated bread wheat (Triticum dicoccoides and T. aestivum) seedlings shows pronounced differences in overall diversity and composition. Di Pietro A, editor. mBio. 2020;11(6):e02637-20.

Article  PubMed  PubMed Central  Google Scholar 

Quiza L, Tremblay J, Pagé AP, Greer CW, Pozniak CJ, Li R, et al. The effect of wheat genotype on the microbiome is more evident in roots and varies through time. ISME Communications. 2023;3(1):32.

Article  PubMed  PubMed Central  Google Scholar 

Latz MAC, Kerrn MH, Sørensen H, Collinge DB, Jensen B, Brown JKM, et al. Succession of the fungal endophytic microbiome of wheat is dependent on tissue-specific interactions between host genotype and environment. Sci Total Environ. 2021;759:143804.

Article  CAS  PubMed  Google Scholar 

Fitzpatrick CR, Salas-González I, Conway JM, Finkel OM, Gilbert S, Russ D, et al. The plant microbiome: from ecology to reductionism and beyond. Annu Rev Microbiol. 2020;74(1):81–100.

Article  CAS  PubMed  Google Scholar 

Neu AT, Allen EE, Roy K. Defining and quantifying the core microbiome: challenges and prospects. Proc Natl Acad Sci USA. 2021;118(51):e2104429118.

Article  CAS  PubMed  PubMed Central  Google Scholar 

Harbort CJ, Hashimoto M, Inoue H, Niu Y, Guan R, Rombolà AD, et al. Root-secreted coumarins and the microbiota interact to improve iron nutrition in Arabidopsis. Cell Host Microbe. 2020;28(6):825-837.e6.

Article  CAS  PubMed  PubMed Central  Google Scholar 

Lu T, Ke M, Lavoie M, Jin Y, Fan X, Zhang Z, et al. Rhizosphere microorganisms can influence the timing of plant flowering. Microbiome. 2018;6(1):231.

Article  PubMed  PubMed Central  Google Scholar 

Zhang Q, Yang J, Zhou X, Ding Y, Wang Y, Zhu X, et al. Soilborne bacterium Klebsiella pneumoniae promotes cluster root formation in white lupin through ethylene mediation. New Phytol. 2023;237(4):1320–32.

Article  CAS  PubMed  Google Scholar 

Raymaekers K, Ponet L, Holtappels D, Berckmans B, Cammue BPA. Screening for novel biocontrol agents applicable in plant disease management – a review. Biol Control. 2020;144:104240.

Article  CAS  Google Scholar 

FAO. Plant production and protection. 2024. Available from: https://www.fao.org/plant-production-protection/about/en. Accessed 26 June 2024.

Soanes DM, Richards TA, Talbot NJ. Insights from sequencing fungal and oomycete genomes: what can we learn about plant disease and the evolution of pathogenicity? Plant Cell. 2007;19(11):3318–26.

Article  CAS  PubMed  PubMed Central  Google Scholar 

Doehlemann G, Ökmen B, Zhu W, Sharon A. Plant pathogenic fungi. Heitman J, Howlett BJ, editors. Microbiol Spectr. 2017;5(1):5.1.14.

Article  Google Scholar 

Thambugala KM, Daranagama DA, Phillips AJL, Kannangara SD, Promputtha I. Fungi vs. fungi in biocontrol: an overview of fungal antagonists applied against fungal plant pathogens. Front Cell Infect Microbiol. 2020;10:604923.

Article  CAS  PubMed  PubMed Central  Google Scholar 

Wang M, Li H, Li J, Zhang W, Zhang J. Streptomyces strains and their metabolites for biocontrol of phytopathogens in agriculture. J Agric Food Chem. 2024;72(4):2077–88.

Article  CAS  PubMed  Google Scholar 

Snelders NC, Rovenich H, Thomma BPHJ. Microbiota manipulation through the secretion of effector proteins is fundamental to the wealth of lifestyles in the fungal kingdom. FEMS Microbiol Rev. 2022;46(5):fuac022.

Article  PubMed  PubMed Central  Google Scholar 

Bass D, Stentiford GD, Wang HC, Koskella B, Tyler CR. The pathobiome in animal and plant diseases. Trends Ecol Evol. 2019;34(11):996–1008.

Article  PubMed  PubMed Central  Google Scholar 

Chen T, Nomura K, Wang X, Sohrabi R, Xu J, Yao L, et al. A plant genetic network for preventing dysbiosis in the phyllosphere. Nature. 2020;580(7805):653–7.

Article  CAS  PubMed  PubMed Central  Google Scholar 

Lo Presti L, Lanver D, Schweizer G, Tanaka S, Liang L, Tollot M, et al. Fungal effectors and plant susceptibility. Annu Rev Plant Biol. 2015;66(1):513–45.

Article  CAS  PubMed  Google Scholar 

Chang H, Noel ZA, Chilvers MI. A β-lactamase gene of Fusarium oxysporum alters the rhizosphere microbiota of soybean. Plant J. 2021;106(6):1588–604.

Article  CAS  PubMed  Google Scholar 

Gao M, Xiong C, Gao C, Tsui CKM, Wang MM, Zhou X, et al. Disease-induced changes in plant microbiome assembly and functional adaptation. Microbiome. 2021;9(1):187.

Article  CAS  PubMed  PubMed Central  Google Scholar 

Kudjordjie EN, Hooshmand K, Sapkota R, Darbani B, Fomsgaard IS, Nicolaisen M. Fusarium oxysporum disrupts microbiome-metabolome networks in Arabidopsis thaliana roots. Gao C, editor. Microbiol Spectr. 2022;10(4):e01226-22.

Article  PubMed  PubMed Central  Google Scholar 

Li Z, Bai X, Jiao S, Li Y, Li P, Yang Y, et al. A simplified synthetic community rescues Astragalus mongholicus from root rot disease by activating plant-induced systemic resistance. Microbiome. 2021;9(1):1–20.

Article  CAS  Google Scholar 

Lin T, Li L, Gu X, Owusu AM, Li S, Han S, et al. Seasonal variations in the composition and diversity of rhizosphere soil microbiome of bamboo plants as infected by soil-borne pathogen and screening of associated antagonistic strains. Ind Crops Prod. 2023;197:116641.

Article  CAS  Google Scholar 

Qiu Z, Verma JP, Liu H, Wang J, Batista BD, Kaur S, et al. Response of the plant core microbiome to Fusarium oxysporum infection and identification of the pathobiome. Environ Microbiol. 2022;24(10):4652–69.

Article  CAS  PubMed  Google Scholar 

Wang CW, Yu YH, Wu CY, Feng RY, Tandon K, Chen YL, et al. Detection of pathogenic and beneficial microbes for roselle wilt disease. Front Microbiol. 2021;1(12):756100.

Article  Google Scholar 

Zhu Z, Wu G, Deng R, Hu X, Tan H, Chen Y, et al. Spatiotemporal biocontrol and rhizosphere microbiome analysis of Fusarium wilt of banana. Commun Biol. 2023;6(1):27.

Article  CAS  PubMed  PubMed Central 

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