Trivedi P, Leach JE, Tringe SG, Sa T, Singh BK. Plant–microbiome interactions: from community assembly to plant health. Nat Rev Microbiol. 2020;18(11):607–21.
Article CAS PubMed Google Scholar
Durán P, Thiergart T, Garrido-Oter R, Agler M, Kemen E, Schulze-Lefert P, et al. Microbial interkingdom interactions in roots promote Arabidopsis survival. Cell. 2018;175(4):973-983. e14.
Article PubMed PubMed Central Google Scholar
Sharon O, Kagan-Trushina N, Sharon A. Wheat fungal endophyte communities are inseparable from the host and influence plant development. Turgeon BG, editor. mBio. 2023;22:e02533-23.
Vorholt JA, Vogel C, Carlström CI, Müller DB. Establishing causality: opportunities of synthetic communities for plant microbiome research. Cell Host Microbe. 2017;22(2):142–55.
Article CAS PubMed Google Scholar
Coleman-Derr D, Desgarennes D, Fonseca-Garcia C, Gross S, Clingenpeel S, Woyke T, et al. Plant compartment and biogeography affect microbiome composition in cultivated and native Agave species. New Phytol. 2016;209(2):798–811.
Article CAS PubMed Google Scholar
Özkurt E, Hassani MA, Sesiz U, Künzel S, Dagan T, Özkan H, et al. Seed-derived microbial colonization of wild emmer and domesticated bread wheat (Triticum dicoccoides and T. aestivum) seedlings shows pronounced differences in overall diversity and composition. Di Pietro A, editor. mBio. 2020;11(6):e02637-20.
Article PubMed PubMed Central Google Scholar
Quiza L, Tremblay J, Pagé AP, Greer CW, Pozniak CJ, Li R, et al. The effect of wheat genotype on the microbiome is more evident in roots and varies through time. ISME Communications. 2023;3(1):32.
Article PubMed PubMed Central Google Scholar
Latz MAC, Kerrn MH, Sørensen H, Collinge DB, Jensen B, Brown JKM, et al. Succession of the fungal endophytic microbiome of wheat is dependent on tissue-specific interactions between host genotype and environment. Sci Total Environ. 2021;759:143804.
Article CAS PubMed Google Scholar
Fitzpatrick CR, Salas-González I, Conway JM, Finkel OM, Gilbert S, Russ D, et al. The plant microbiome: from ecology to reductionism and beyond. Annu Rev Microbiol. 2020;74(1):81–100.
Article CAS PubMed Google Scholar
Neu AT, Allen EE, Roy K. Defining and quantifying the core microbiome: challenges and prospects. Proc Natl Acad Sci USA. 2021;118(51):e2104429118.
Article CAS PubMed PubMed Central Google Scholar
Harbort CJ, Hashimoto M, Inoue H, Niu Y, Guan R, Rombolà AD, et al. Root-secreted coumarins and the microbiota interact to improve iron nutrition in Arabidopsis. Cell Host Microbe. 2020;28(6):825-837.e6.
Article CAS PubMed PubMed Central Google Scholar
Lu T, Ke M, Lavoie M, Jin Y, Fan X, Zhang Z, et al. Rhizosphere microorganisms can influence the timing of plant flowering. Microbiome. 2018;6(1):231.
Article PubMed PubMed Central Google Scholar
Zhang Q, Yang J, Zhou X, Ding Y, Wang Y, Zhu X, et al. Soilborne bacterium Klebsiella pneumoniae promotes cluster root formation in white lupin through ethylene mediation. New Phytol. 2023;237(4):1320–32.
Article CAS PubMed Google Scholar
Raymaekers K, Ponet L, Holtappels D, Berckmans B, Cammue BPA. Screening for novel biocontrol agents applicable in plant disease management – a review. Biol Control. 2020;144:104240.
FAO. Plant production and protection. 2024. Available from: https://www.fao.org/plant-production-protection/about/en. Accessed 26 June 2024.
Soanes DM, Richards TA, Talbot NJ. Insights from sequencing fungal and oomycete genomes: what can we learn about plant disease and the evolution of pathogenicity? Plant Cell. 2007;19(11):3318–26.
Article CAS PubMed PubMed Central Google Scholar
Doehlemann G, Ökmen B, Zhu W, Sharon A. Plant pathogenic fungi. Heitman J, Howlett BJ, editors. Microbiol Spectr. 2017;5(1):5.1.14.
Thambugala KM, Daranagama DA, Phillips AJL, Kannangara SD, Promputtha I. Fungi vs. fungi in biocontrol: an overview of fungal antagonists applied against fungal plant pathogens. Front Cell Infect Microbiol. 2020;10:604923.
Article CAS PubMed PubMed Central Google Scholar
Wang M, Li H, Li J, Zhang W, Zhang J. Streptomyces strains and their metabolites for biocontrol of phytopathogens in agriculture. J Agric Food Chem. 2024;72(4):2077–88.
Article CAS PubMed Google Scholar
Snelders NC, Rovenich H, Thomma BPHJ. Microbiota manipulation through the secretion of effector proteins is fundamental to the wealth of lifestyles in the fungal kingdom. FEMS Microbiol Rev. 2022;46(5):fuac022.
Article PubMed PubMed Central Google Scholar
Bass D, Stentiford GD, Wang HC, Koskella B, Tyler CR. The pathobiome in animal and plant diseases. Trends Ecol Evol. 2019;34(11):996–1008.
Article PubMed PubMed Central Google Scholar
Chen T, Nomura K, Wang X, Sohrabi R, Xu J, Yao L, et al. A plant genetic network for preventing dysbiosis in the phyllosphere. Nature. 2020;580(7805):653–7.
Article CAS PubMed PubMed Central Google Scholar
Lo Presti L, Lanver D, Schweizer G, Tanaka S, Liang L, Tollot M, et al. Fungal effectors and plant susceptibility. Annu Rev Plant Biol. 2015;66(1):513–45.
Article CAS PubMed Google Scholar
Chang H, Noel ZA, Chilvers MI. A β-lactamase gene of Fusarium oxysporum alters the rhizosphere microbiota of soybean. Plant J. 2021;106(6):1588–604.
Article CAS PubMed Google Scholar
Gao M, Xiong C, Gao C, Tsui CKM, Wang MM, Zhou X, et al. Disease-induced changes in plant microbiome assembly and functional adaptation. Microbiome. 2021;9(1):187.
Article CAS PubMed PubMed Central Google Scholar
Kudjordjie EN, Hooshmand K, Sapkota R, Darbani B, Fomsgaard IS, Nicolaisen M. Fusarium oxysporum disrupts microbiome-metabolome networks in Arabidopsis thaliana roots. Gao C, editor. Microbiol Spectr. 2022;10(4):e01226-22.
Article PubMed PubMed Central Google Scholar
Li Z, Bai X, Jiao S, Li Y, Li P, Yang Y, et al. A simplified synthetic community rescues Astragalus mongholicus from root rot disease by activating plant-induced systemic resistance. Microbiome. 2021;9(1):1–20.
Lin T, Li L, Gu X, Owusu AM, Li S, Han S, et al. Seasonal variations in the composition and diversity of rhizosphere soil microbiome of bamboo plants as infected by soil-borne pathogen and screening of associated antagonistic strains. Ind Crops Prod. 2023;197:116641.
Qiu Z, Verma JP, Liu H, Wang J, Batista BD, Kaur S, et al. Response of the plant core microbiome to Fusarium oxysporum infection and identification of the pathobiome. Environ Microbiol. 2022;24(10):4652–69.
Article CAS PubMed Google Scholar
Wang CW, Yu YH, Wu CY, Feng RY, Tandon K, Chen YL, et al. Detection of pathogenic and beneficial microbes for roselle wilt disease. Front Microbiol. 2021;1(12):756100.
Zhu Z, Wu G, Deng R, Hu X, Tan H, Chen Y, et al. Spatiotemporal biocontrol and rhizosphere microbiome analysis of Fusarium wilt of banana. Commun Biol. 2023;6(1):27.
留言 (0)