Association of NID2 SNPs with Glioma Risk and Prognosis in the Chinese Population

Barfield, R., Huyghe, J. R., Lemire, M., Dong, X., Su, Y. R., Brezina, S., Buchanan, D. D., Figueiredo, J. C., Gallinger, S., Giannakis, M., & Gsur, A. (2022). Genetic regulation of DNA methylation yields novel discoveries in GWAS of colorectal cancer. Cancer Epidemiology Biomarkers & Prevention, 31(5), 1068–1076.

Article  CAS  Google Scholar 

Brellier, F., Ruggiero, S., Zwolanek, D., Martina, E., Hess, D., Brown-Luedi, M., Hartmann, U., Koch, M., Merlo, A., Lino, M., & Chiquet-Ehrismann, R. (2011). SMOC1 is a tenascin-C interacting protein over-expressed in brain tumors. Matrix Biology, 30(3), 225–233.

Article  CAS  PubMed  Google Scholar 

Cote, D. J., Samanic, C. M., Smith, T. R., Wang, M., Smith-Warner, S. A., Stampfer, M. J., & Egan, K. M. (2021). Alcohol intake and risk of glioma: Results from three prospective cohort studies. European Journal of Epidemiology, 36(9), 965–974.

Article  PubMed  PubMed Central  Google Scholar 

Dorani, F., Hu, T., Woods, M. O., & Zhai, G. (2018). Ensemble learning for detecting gene-gene interactions in colorectal cancer. PeerJ, 6, e5854.

Article  PubMed  PubMed Central  Google Scholar 

Ellis, J. A., & Ong, B. (2017). The MassARRAY((R)) system for targeted SNP genotyping. Methods in Molecular Biology, 1492, 77–94.

Article  CAS  PubMed  Google Scholar 

Enciso-Mora, V., Hosking, F. J., Di Stefano, A. L., Zelenika, D., Shete, S., Broderick, P., Idbaih, A., Delattre, J. Y., Hoang-Xuan, K., Marie, Y., & Labussière, M. (2013). Low penetrance susceptibility to glioma is caused by the TP53 variant rs78378222. British Journal of Cancer, 108(10), 2178–2185.

Article  CAS  PubMed  PubMed Central  Google Scholar 

Esposito, M. R., Binatti, A., Pantile, M., Coppe, A., Mazzocco, K., Longo, L., Capasso, M., Lasorsa, V. A., Luksch, R., Bortoluzzi, S., & Tonini, G. P. (2018). Somatic mutations in specific and connected subpathways are associated with short neuroblastoma patients’ survival and indicate proteins targetable at onset of disease. International Journal of Cancer, 143(10), 2525–2536.

Article  CAS  PubMed  Google Scholar 

Guo, X., Song, J., Zhao, J., Wang, B., Yang, Z., Sun, P., & Hu, M. (2019). Impact of ANXA5 polymorphisms on glioma risk and patient prognosis. Journal of Neuro-Oncology, 142(1), 11–26.

Article  CAS  PubMed  Google Scholar 

Howell, A. E., Robinson, J. W., Wootton, R. E., McAleenan, A., Tsavachidis, S., Ostrom, Q. T., Bondy, M., Armstrong, G., Relton, C., Haycock, P., & Martin, R. M. (2020). Testing for causality between systematically identified risk factors and glioma: A mendelian randomization study. BMC Cancer, 20, 1–11.

Article  Google Scholar 

Huang, D., Zhou, Y., Yi, X., Fan, X., Wang, J., Yao, H., Sham, P. C., Hao, J., Chen, K., & Li, M. J. (2022). VannoPortal: Multiscale functional annotation of human genetic variants for interrogating molecular mechanism of traits and diseases. Nucleic Acids Research, 50(D1), D1408-d1416.

Article  CAS  PubMed  Google Scholar 

Jameson, N. M., Ma, J., Benitez, J., Izurieta, A., Han, J. Y., Mendez, R., Parisian, A., & Furnari, F. (2019). Intron 1-mediated regulation of EGFR expression in EGFR-dependent malignancies is mediated by AP-1 and BET proteins. Molecular Cancer Research, 17(11), 2208–2220.

Article  CAS  PubMed  Google Scholar 

Jiang, T., Nam, D. H., Ram, Z., Poon, W. S., Wang, J., Boldbaatar, D., Mao, Y., Ma, W., Mao, Q., You, Y., & Jiang, C. (2021). Clinical practice guidelines for the management of adult diffuse gliomas. Cancer Letters, 499, 60–72.

Article  CAS  PubMed  Google Scholar 

Kohfeldt, E., Sasaki, T., Göhring, W., & Timpl, R. (1998). Nidogen-2: A new basement membrane protein with diverse binding properties. Journal of Molecular Biology, 282(1), 99–109.

Article  CAS  PubMed  Google Scholar 

Louis, D. N., Ohgaki, H., Wiestler, O. D., Cavenee, W. K., Burger, P. C., Jouvet, A., Scheithauer, B. W., & Kleihues, P. (2007). The 2007 WHO classification of tumours of the central nervous system. Acta Neuropathologica, 114(2), 97–109.

Article  PubMed  PubMed Central  Google Scholar 

Louis, D. N., Perry, A., Reifenberger, G., von Deimling, A., Figarella-Branger, D., Cavenee, W. K., Ohgaki, H., Wiestler, O. D., Kleihues, P., & Ellison, D. W. (2016). The 2016 world health organization classification of tumors of the central nervous system: A summary. Acta Neuropathologica, 131(6), 803–820.

Article  PubMed  Google Scholar 

Louis, D. N., Perry, A., Wesseling, P., Brat, D. J., Cree, I. A., Figarella-Branger, D., Hawkins, C., Ng, H. K., Pfister, S. M., Reifenberger, G., Soffietti, R., Deimling, A., & Ellison, D. W. (2021). The 2021 WHO classification of tumors of the central nervous system: A summary. Neuro-Oncology, 23(8), 1231–1251.

Article  CAS  PubMed  PubMed Central  Google Scholar 

Mao, F., Holmlund, C., Faraz, M., Wang, W., Bergenheim, T., Kvarnbrink, S., Johansson, M., Henriksson, R., & Hedman, H. (2018). Lrig1 is a haploinsufficient tumor suppressor gene in malignant glioma. Oncogenesis, 7(2), 13.

Article  PubMed  PubMed Central  Google Scholar 

Martino-Echarri, E., Fernández-Rodríguez, R., Rodríguez-Baena, F. J., Barrientos-Durán, A., Torres-Collado, A. X., del Carmen Plaza-Calonge, M., Amador-Cubero, S., Cortés, J., Reynolds, L. E., Hodivala-Dilke, K. M., & Rodríguez-Manzaneque, J. C. (2013). Contribution of ADAMTS1 as a tumor suppressor gene in human breast carcinoma. Linking its tumor inhibitory properties to its proteolytic activity on nidogen-1 and nidogen-2. International Journal of Cancer, 133(10), 2315–2324.

Article  CAS  PubMed  Google Scholar 

Massey, S. C., Whitmire, P., Doyle, T. E., Ippolito, J. E., Mrugala, M. M., Hu, L. S., Canoll, P., Anderson, A. R., Wilson, M. A., Fitzpatrick, S. M., & McCarthy, M. M. (2021). Sex differences in health and disease: A review of biological sex differences relevant to cancer with a spotlight on glioma. Cancer Letters, 498, 178–187.

Article  CAS  PubMed  Google Scholar 

Molinaro, A. M., Taylor, J. W., Wiencke, J. K., & Wrensch, M. R. (2019). Genetic and molecular epidemiology of adult diffuse glioma. Nature Reviews Neurology, 15(7), 405–417.

Article  PubMed  PubMed Central  Google Scholar 

Oeth, P., del Mistro, G., Marnellos, G., Shi, T., & van den Boom, D. (2009). Qualitative and quantitative genotyping using single base primer extension coupled with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MassARRAY). Methods in Molecular Biology, 578, 307–343.

Article  CAS  PubMed  Google Scholar 

Ostrom, Q. T., Patil, N., Cioffi, G., Waite, K., Kruchko, C., & Barnholtz-Sloan, J. S. (2020). CBTRUS statistical report: Primary brain and other central nervous system tumors diagnosed in the United States in 2013–2017. Neuro-Oncology. https://doi.org/10.1093/neuonc/noaa200

Article  PubMed  PubMed Central  Google Scholar 

Peng, G., Wang, Y., Ge, P., Bailey, C., Zhang, P., Zhang, D., Meng, Z., Qi, C., Chen, Q., Chen, J., & Niu, J. (2021). The HIF1α-PDGFD-PDGFRα axis controls glioblastoma growth at normoxia/mild-hypoxia and confers sensitivity to targeted therapy by echinomycin. Journal of Experimental & Clinical Cancer Research, 40, 1–16.

Article  Google Scholar 

Pinney, E., Zimber, M., Schenone, A., Montes-Camacho, M., Ziegler, F., & Naughton, G. K. (2011). Human embryonic-like ECM (hECM) stimulates proliferation and differentiation in stem cells while killing cancer cells. International Journal of Stem Cells, 4(1), 70–75.

Article  CAS  PubMed  PubMed Central  Google Scholar 

Pongpanich, M., Sanguansin, S., Kengkarn, S., Chaiwongkot, A., Klongnoi, B., & Kitkumthorn, N. (2021). An integrative analysis of genome-wide methylation and expression in ameloblastoma: A pilot study. Oral Diseases, 27(6), 1455–1467.

Article  PubMed  Google Scholar 

Quan, C., Ping, J., Lu, H., Zhou, G., & Lu, Y. (2020). 3DSNP 20: Update and expansion of the noncoding genomic variant annotation database. Nucleic Acids Research. https://doi.org/10.1093/nar/gkab1008

Article  Google Scholar 

Ren, S., Gaykalova, D., Wang, J., Guo, T., Danilova, L., Favorov, A., Fertig, E., Bishop, J., Khan, Z., Flam, E., & Wysocki, P. T. (2018). Discovery and development of differentially methylated regions in human papillomavirus-related oropharyngeal squamous cell carcinoma. International Journal of Cancer, 143(10), 2425–2436.

Article  CAS  PubMed  Google Scholar 

Rose, M., Bringezu, S., Godfrey, L., Fiedler, D., Gaisa, N. T., Koch, M., Bach, C., Füssel, S., Herr, A., Hübner, D., & Ellinger, J. (2020). ITIH5 and ECRG4 DNA methylation biomarker test (EI-BLA) for urine-based non-invasive detection of bladder cancer. International Journal of Molecular Sciences, 21(3), 1117.

Article  CAS  PubMed  PubMed Central  Google Scholar 

Sancar, F. (2019). Quick uptakes: Sex-specific tumor signatures help explain differences in glioblastoma survival. JAMA,

留言 (0)

沒有登入
gif