Revealing the genomic diversity of North-western Indian people through 20 hypervariable genetic markers

Balamurugan K, Kanthimathi S, Vijaya M, Suhasini G, Duncan G, Tracey M, Budowle B. Genetic variation of 15 autosomal microsatellite loci in a Tamil population from Tamil Nadu Southern India. Leg Med. 2010;12(6):320–3.

Article  CAS  Google Scholar 

Banerjee J, Trivedi R, Kashyap VK. Polymorphism at 15 short tandem repeat AmpFℓSTR® Identifiler™ loci in three aboriginal populations of India: an assessment in human identification. J Forensic Sci. 2005;50(5):JFS2005151–6. https://doi.org/10.1520/JFS2005151.

Article  Google Scholar 

GH Bindu, R Trivedi, VK Kashyap. Population genetics of 17 microsatellite loci in three major groups of Andhra Pradesh, India. Research and Technology. 2005;7(2)

Butler JM. Recent advances in forensic biology and forensic DNA typing: INTERPOL review 2019–2022. Forensic Sci Int Synerg. 2023;6:100311. https://doi.org/10.1016/j.fsisyn.2022.100311.

Article  PubMed  Google Scholar 

Chandramouli C. Census of India 2011 provisional population totals. New Delhi: Govt India; 2011.

Google Scholar 

Chaubey G, Tamang R, Pennarun E, Dubey P, Rai N, Upadhyay RK, Meena RP, Patel JR, Van Driem G, Thangaraj K. Reconstructing the population history of the largest tribe of India: the Dravidian speaking Gond. Eur J Hum Genet. 2017;25(4):493–8.

Article  PubMed  PubMed Central  Google Scholar 

Chaudhari RR, Dahiya MS. Genetic diversity of 15 autosomal short tandem repeats loci using the AmpFLSTR® Identifiler™ kit in a Bhil Tribe population from Gujarat state India. Indian J Hum Genet. 2014;20(2):148–52.

Article  CAS  PubMed  PubMed Central  Google Scholar 

Dixit S, Shrivastava P, Kumawat RK, Kaitholia K, Dash HR, Sharma H, Choubey G. Forensic genetic analysis of population of Madhya Pradesh with PowerPlex Fusion 6CTM multiplex system. Int J Leg Med. 2019;133:803–5.

Article  Google Scholar 

Excoffier L, Laval G, Schneider S. Arlequin (version 3.0): an integrated software package for population genetics data analysis. Evol Bioinform. 2005;1:47–50. https://doi.org/10.1177/117693430500100003.

Article  CAS  Google Scholar 

Ghosh T, Kalpana D, Mukerjee S, Mukherjee M, Sharma AK, Nath S, Rathod VR, Thakar MK, Jha GN. Genetic diversity of autosomal STRs in eleven populations of India. Forensic Sci Int Genet. 2011;5(3):259–61.

Article  CAS  PubMed  Google Scholar 

Giroti R, Talwar I. Diversity and differentiation in Khatris, Banias and Jat Sikhs of Punjab: a study with forensic microsatellites. Indian J Phys Anthrop Hum Genet. 2013;32(2):309–28.

Google Scholar 

Imam J, Reyaz R, Singh RS, Bapuly AK, Shrivastava P. Genomic portrait of population of Jharkhand, India, drawn with 15 autosomal STRs and 17 Y-STRs. Int J Leg Med. 2017;132(1):139–40. https://doi.org/10.1007/s00414-017-1610-x.

Article  Google Scholar 

Kaitholia K, Shrivastava P, Chaubey G. A case of “false tri-allelic pattern” on D7S820, caused by invasion of a short SE33 allele into the bins of D7S820. Int J Leg Med. 2021;135(2):427–30.

Article  Google Scholar 

Kumawat RK, Shrivastava P, Shrivastava D, Mathur GK. Molecular diversity of 23 Y-STR genetic markers in the population of Rajasthan India. Meta Gene. 2020;24:100694. https://doi.org/10.1016/j.mgene.2020.100694.

Article  Google Scholar 

Kumawat RK, Shrivastava P, Shrivastava D, Mathur GK, Dash HR, Chaubey G. Peopling of Rajasthan, India: evaluating the gene flow from east and west. Gene Rep. 2020;22:100990.

Article  Google Scholar 

Kumawat RK, Shrivastava P, Shrivastava D, Mathur GK, Dash HR, Chaubey G. Peopling of Rajasthan, India: evaluating the gene flow from east and west. Gene Rep. 2021;22: 100990.

Article  CAS  Google Scholar 

Kumawat RK, Shrivastava P, Divya Shrivastava GK, Mathur SD. Genomic blueprint of population of Rajasthan based on autosomal STR markers. Ann Hum Biol. 2020;47(1):70–5. https://doi.org/10.1080/03014460.2019.1705390.

Article  CAS  PubMed  Google Scholar 

Liu Y, Guo L, Jin H, Li Z, Bai R, Shi M, Ma S. Developmental validation of a 6-dye typing system with 27 loci and application in Han population of China. Sci Rep. 2017;7(1):1–9. https://doi.org/10.1038/s41598-017-04548-1.

Article  CAS  Google Scholar 

Mohapatra BK, Chauhan K, Shrivastava P, Shivani Dixit RK, Kumawat AS, Dagar S, Chaubey G. A genomic exploration of 15 autosomal STR loci for establishment of a DNA profile database of the population of Himachal Pradesh. Leg Med. 2020;46:101719. https://doi.org/10.1016/j.legalmed.2020.101719.

Article  CAS  Google Scholar 

Peakall ROD, Smouse PE. GENALEX 6: genetic analysis in excel. Population genetic software for teaching and research. Mol Ecol Notes. 2006;6(1):288–95.

Article  Google Scholar 

Reich D, Thangaraj K, Patterson N, Price AL, Singh L. Reconstructing Indian population history. Nature. 2009;461(7263):489–94.

Article  CAS  PubMed  PubMed Central  Google Scholar 

Rickham PP. Human experimentation. Code of ethics of the world medical association. Declaration of Helsinki. Br Med J. 1964;2(5402):177.

Article  CAS  PubMed  Google Scholar 

Sahoo S, Samal R, Behera S, Swain AK, Biswas S, Shrivastava P, Kumawat RK, Chaubey G, Dash HR. Genomic portrait of Odisha India drawn by using 21 autosomal STR markers. Int J Leg Med. 2020;134(5):1671–3.

Article  Google Scholar 

Dixit S, Shrivastava P, Dash HR, Kaitholia K, Sahajpal V, Sahoo S, Srivastava V, SurekhaRani H, Mishra A, Choudhary SK, Thekkatavan A, Chaubey G, Kumawat RK. Assessment of significance and forensic relevance of SE33 (ACTBP2) locus in five Indian populations. Gene Reports. 2021;24(8):101293.

Article  CAS  Google Scholar 

Shrivastava P, Jain T, Trivedi VB. Genetic polymorphism study at 15 autosomal locus in central Indian population. Springerplus. 2015;4(1):566.

Article  PubMed  PubMed Central  Google Scholar 

Shrivastava P, Jain T, Trivedi VB. Structure and genetic relationship of five populations from central India based on 15 autosomal STR loci. Ann Hum Biol. 2017;44(1):74–86. https://doi.org/10.3109/03014460.2016.1151932.

Article  PubMed  Google Scholar 

Shrivastava P, Kaitholia K, Kumawat RK, Dixit S, Dash HR, Srivastava A, Baroniya Y, Mishra A, Kushwaha P, Rana M. Forensic effectiveness and genetic distribution of 23 autosomal STRs included in Verifiler Plus TM multiplex in a population sample from Madhya Pradesh India. Int J Leg Med. 2019;134(4):1327–8.

Article  Google Scholar 

Singh A, Trivedi R, Kashyap VK. Genetic polymorphism at 15 tetrameric short tandem repeat loci in four aboriginal tribal populations of Bengal. J Forensic Sci. 2006;51(1):183–7.

Article  CAS  PubMed  Google Scholar 

Song B, Jiewen Fu, Guo K, Qian J, He T, Yang L, Cheng J, Junjiang Fu. A Tibetan group from Ngawa Tibetan and Qiang autonomous prefecture, southwest China, is rich in genetic polymorphisms at 36 autosomal STR loci and shares a complex genetic structure with other Chinese populations. Heliyon. 2023;9(12):e23005. https://doi.org/10.1016/j.heliyon.2023.e23005.

Article  CAS  PubMed  PubMed Central  Google Scholar 

Sreekumar R, Thekkatavan A, Pankaj Shrivastava RK, Kumawat SD, Chaubey G. Allelic frequency database of 15 polymorphic autosomal STRs in the Malayalam-speaking population of Kerala, India. Int J Leg Med. 2020;134(5):1679–81. https://doi.org/10.1007/s00414-020-02286-0.

Article  CAS  Google Scholar 

Srivastava A, Kumawat R, Dixit S, Kaitholia K, Shrivastava D, Yadav VK, Nigam K, Sharma H, Trivedi VB, Chaubey G. Genetic data for PowerPlex 21TM autosomal and PowerPlex 23 Y-STRTM loci from population of the state of Uttar Pradesh India. Int J Leg Med. 2019;133(5):1381–3.

Article  Google Scholar 

Srivastava V, Surekha Rani H, Kumawat RK, Chaubey G, Shrivastava P. Genomic diversity of the Muslim population from Telangana (India) inferred from 23 autosomal STRs. Ann Hum Biol. 2020;47(7–8):652–8.

Article  PubMed  Google Scholar 

Tereba A. Tools for analysis of population statistics. Profiles DNA. 1999;2:14–6.

Google Scholar 

Xiao C, Yang X, Yu Z, Wu W, Wang Y, Xu Q, Chen L. Genetic polymorphism and variability in the Guangdong Hakka, Teochew, and Cantonese groups: a comprehensive analysis of 19 X-STRs. Ann Hum Genet. 2023;87(5):232–40.

Article  CAS  PubMed  Google Scholar 

留言 (0)

沒有登入
gif