Ashkenazy, H., Abadi, S., Martz, E., Chay, O., Mayrose, I., Pupko, T. & Ben-Tal, N. (2016). Nucleic Acids Res. 44, W344–W350. Web of Science CrossRef CAS PubMed Google Scholar
Baek, M., DiMaio, F., Anishchenko, I., Dauparas, J., Ovchinnikov, S., Lee, G. R., Wang, J., Cong, Q., Kinch, L. N., Schaeffer, R. D., Millán, C., Park, H., Adams, C., Glassman, C. R., DeGiovanni, A., Pereira, J. H., Rodrigues, A. V., van Dijk, A. A., Ebrecht, A. C., Opperman, D. J., Sagmeister, T., Buhlheller, C., Pavkov-Keller, T., Rathinaswamy, M. K., Dalwadi, U., Yip, C. K., Burke, J. E., Garcia, K. C., Grishin, N. V., Adams, P. D., Read, R. J. & Baker, D. (2021). Science, 373, 871–876. Web of Science CrossRef CAS PubMed Google Scholar
Beeby, M., Bobik, T. A. & Yeates, T. O. (2009). Protein Sci. 18, 69–79. CrossRef PubMed CAS Google Scholar
Clabbers, M. T. B., Holmes, S., Muusse, T. W., Vajjhala, P. R., Thygesen, S. J., Malde, A. K., Hunter, D. J. B., Croll, T. I., Flueckiger, L., Nanson, J. D., Rahaman, Md. H., Aquila, A., Hunter, M. S., Liang, M., Yoon, C. H., Zhao, J., Zatsepin, N. A., Abbey, B., Sierecki, E., Gambin, Y., Stacey, K. J., Darmanin, C., Kobe, B., Xu, H. & Ve, T. (2021). Nat. Commun. 12, 2578. Web of Science CrossRef PubMed Google Scholar
Danelius, E., Porter, N. J., Unge, J., Arnold, F. H. & Gonen, T. (2023). J. Am. Chem. Soc. 145, 7159–7165. CrossRef CAS PubMed Google Scholar
Emsley, P., Lohkamp, B., Scott, W. G. & Cowtan, K. (2010). Acta Cryst. D66, 486–501. Web of Science CrossRef CAS IUCr Journals Google Scholar
Giorgetti, A., Raimondo, D., Miele, A. E. & Tramontano, A. (2005). Bioinformatics, 21, ii72–ii76. Web of Science CrossRef PubMed CAS Google Scholar
Holm, L. & Laakso, L. M. (2016). Nucleic Acids Res. 44, W351–W355. Web of Science CrossRef CAS PubMed Google Scholar
Johansson, L. C., Stauch, B., Ishchenko, A. & Cherezov, V. (2017). Trends Biochem. Sci. 42, 749–762. Web of Science CrossRef CAS PubMed Google Scholar
Jumper, J., Evans, R., Pritzel, A., Green, T., Figurnov, M., Ronneberger, O., Tunyasuvunakool, K., Bates, R., Žídek, A., Potapenko, A., Bridgland, A., Meyer, C., Kohl, S. A. A., Ballard, A. J., Cowie, A., Romera-Paredes, B., Nikolov, S., Jain, R., Adler, J., Back, T., Petersen, S., Reiman, D., Clancy, E., Zielinski, M., Steinegger, M., Pacholska, M., Berghammer, T., Bodenstein, S., Silver, D., Vinyals, O., Senior, A. W., Kavukcuoglu, K., Kohli, P. & Hassabis, D. (2021). Nature, 596, 583–589. Web of Science CrossRef CAS PubMed Google Scholar
Kabsch, W. (2010). Acta Cryst. D66, 125–132. Web of Science CrossRef CAS IUCr Journals Google Scholar
Kempen, M. van, Kim, S. S., Tumescheit, C., Mirdita, M., Lee, J., Gilchrist, C. L. M., Söding, J. & Steinegger, M. (2023). Nat. Biotechnol., https://doi.org/10.1038/s41587-023-01773-0. Google Scholar
Liebschner, D., Afonine, P. V., Baker, M. L., Bunkóczi, G., Chen, V. B., Croll, T. I., Hintze, B., Hung, L.-W., Jain, S., McCoy, A. J., Moriarty, N. W., Oeffner, R. D., Poon, B. K., Prisant, M. G., Read, R. J., Richardson, J. S., Richardson, D. C., Sammito, M. D., Sobolev, O. V., Stockwell, D. H., Terwilliger, T. C., Urzhumtsev, A. G., Videau, L. L., Williams, C. J. & Adams, P. D. (2019). Acta Cryst. D75, 861–877. Web of Science CrossRef IUCr Journals Google Scholar
Martynowycz, M. W., Clabbers, M. T. B., Hattne, J. & Gonen, T. (2022). Nat. Methods, 19, 724–729. CrossRef CAS PubMed Google Scholar
Martynowycz, M. W. & Gonen, T. (2018). Curr. Opin. Colloid Interface Sci. 34, 9–16. CrossRef CAS PubMed Google Scholar
Martynowycz, M. W. & Gonen, T. (2021). Structure, 29, 88–95. CrossRef CAS PubMed Google Scholar
Martynowycz, M. W., Shiriaeva, A., Ge, X., Hattne, J., Nannenga, B. L., Cherezov, V. & Gonen, T. (2021). Proc. Natl Acad. Sci. USA, 118, e2106041118. CrossRef PubMed Google Scholar
McCoy, A. J., Grosse-Kunstleve, R. W., Adams, P. D., Winn, M. D., Storoni, L. C. & Read, R. J. (2007). J. Appl. Cryst. 40, 658–674. Web of Science CrossRef CAS IUCr Journals Google Scholar
Nannenga, B. L., Bu, G. & Shi, D. (2018). Front. Mol. Biosci. 5, 114. CrossRef PubMed Google Scholar
Nannenga, B. L. & Gonen, T. (2014). Curr. Opin. Struct. Biol. 27, 24–31. Web of Science CrossRef CAS PubMed Google Scholar
Nannenga, B. L. & Gonen, T. (2018). Emerg. Top. Life Sci. 2, 1–8. Web of Science CrossRef CAS PubMed Google Scholar
Rodriguez, J. A., Ivanova, M. I., Sawaya, M. R., Cascio, D., Reyes, F. E., Shi, D., Sangwan, S., Guenther, E. L., Johnson, L. M., Zhang, M., Jiang, L., Arbing, M. A., Nannenga, B. L., Hattne, J., Whitelegge, J., Brewster, A. S., Messerschmidt, M., Boutet, S., Sauter, N. K., Gonen, T. & Eisenberg, D. S. (2015). Nature, 525, 486–490. Web of Science CrossRef CAS PubMed Google Scholar
Shi, D., Nannenga, B. L., Iadanza, M. G. & Gonen, T. (2013). eLife, 2, e01345. Web of Science CrossRef PubMed Google Scholar
Shiriaeva, A., Martynowycz, M. W., Nicolas, W. J., Cherezov, V. & Gonen, T. (2023). bioRxiv, 2023.07.05.547888. Google Scholar
Terwilliger, T. C., Afonine, P. V., Liebschner, D., Croll, T. I., McCoy, A. J., Oeffner, R. D., Williams, C. J., Poon, B. K., Richardson, J. S., Read, R. J. & Adams, P. D. (2023). Acta Cryst. D79, 234–244. Web of Science CrossRef IUCr Journals Google Scholar
Thompson, M. C. & Yeates, T. O. (2014). Acta Cryst. D70, 203–208. Web of Science CrossRef CAS IUCr Journals Google Scholar
Thompson, M. C., Yeates, T. O. & Rodriguez, J. A. (2020). F1000Res. 9, 667. Google Scholar
Xu, H., Lebrette, H., Clabbers, M. T. B., Zhao, J., Griese, J. J., Zou, X. & Högbom, M. (2019). Sci. Adv. 5, eaax4621. Web of Science CrossRef PubMed Google Scholar
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