Koné, M. C. et al. Three-dimensional distribution of UBF and Nopp140 in relationship to ribosomal DNA transcription during mouse preimplantation development. Biol. Reprod. 94, 95 (2016).
Biggiogera, M. et al. Nucleolar distribution of proteins B23 and nucleolin in mouse preimplantation embryos as visualized by immunoelectron microscopy. Development 110, 1263–1270 (1990).
Article CAS PubMed Google Scholar
Kresoja-Rakic, J. & Santoro, R. Nucleolus and rRNA gene chromatin in early embryo development. Trends Genet. 35, 868–879 (2019).
Article CAS PubMed PubMed Central Google Scholar
Fulka, H. & Aoki, F. Nucleolus precursor bodies and ribosome biogenesis in early mammalian embryos: old theories and new discoveries. Biol. Reprod. 94, 143 (2016).
Bouckenheimer, J. et al. Long non-coding RNAs in human early embryonic development and their potential in ART. Hum. Reprod. Update 23, 19–40 (2016).
Carlevaro-Fita, J. & Johnson, R. Global positioning system: understanding long noncoding RNAs through subcellular localization. Mol. Cell 73, 869–883 (2019).
Article CAS PubMed Google Scholar
Yan, L. et al. Single-cell RNA-seq profiling of human preimplantation embryos and embryonic stem cells. Nat. Struct. Mol. Biol. 20, 1131–1139 (2013).
Article CAS PubMed Google Scholar
Li, D. F. et al. Activity dependent LoNA regulates translation by coordinating rRNA transcription and methylation. Nat. Commun. 9, 1726 (2018).
Article PubMed PubMed Central Google Scholar
Macfarlan, T. S. et al. Embryonic stem cell potency fluctuates with endogenous retrovirus activity. Nature 487, 57–63 (2012).
Article CAS PubMed PubMed Central Google Scholar
Ishiuchi, T. et al. Early embryonic-like cells are induced by downregulating replication-dependent chromatin assembly. Nat. Struct. Mol. Biol. 22, 662–671 (2015).
Article CAS PubMed Google Scholar
Nachmani, D. et al. Germline NPM1 mutations lead to altered rRNA 2’-O-methylation and cause dyskeratosis congenita. Nat. Genet. 51, 1518–1529 (2019).
Article CAS PubMed PubMed Central Google Scholar
Frottin, F. et al. The nucleolus functions as a phase-separated protein quality control compartment. Science 365, 342–347 (2019).
Article CAS PubMed Google Scholar
Feric, M. et al. Coexisting liquid phases underlie nucleolar subcompartments. Cell 165, 1686–1697 (2016).
Article CAS PubMed PubMed Central Google Scholar
Leung, A. K. et al. Quantitative kinetic analysis of nucleolar breakdown and reassembly during mitosis in live human cells. J. Cell Biol. 166, 787–800 (2004).
Article CAS PubMed PubMed Central Google Scholar
Percharde, M. et al. A LINE1-nucleolin partnership regulates early development and ESC identity. Cell 174, 391–405 (2018).
Article CAS PubMed PubMed Central Google Scholar
Xia, W. et al. Resetting histone modifications during human parental-to-zygotic transition. Science 365, 353–360 (2019).
Article CAS PubMed Google Scholar
Shandilya, J. et al. Acetylated NPM1 localizes in the nucleoplasm and regulates transcriptional activation of genes implicated in oral cancer manifestation. Mol. Cell Biol. 29, 5115–5127 (2009).
Article CAS PubMed PubMed Central Google Scholar
Swaminathan, V., Kishore, A. H., Febitha, K. K. & Kundu, T. K. Human histone chaperone nucleophosmin enhances acetylation-dependent chromatin transcription. Mol. Cell Biol. 25, 7534–7545 (2005).
Article CAS PubMed PubMed Central Google Scholar
Federici, L. et al. Nucleophosmin C-terminal leukemia-associated domain interacts with G-rich quadruplex forming DNA. J. Biol. Chem. 285, 37138–37149 (2010).
Article CAS PubMed PubMed Central Google Scholar
Laugesen, A., Højfeldt, J. W. & Helin, K. Molecular mechanisms directing PRC2 recruitment and H3K27 methylation. Mol. Cell 74, 8–18 (2019).
Article CAS PubMed PubMed Central Google Scholar
Liu, X. et al. Distinct features of H3K4me3 and H3K27me3 chromatin domains in pre-implantation embryos. Nature 537, 558–562 (2016).
Article CAS PubMed Google Scholar
Vastenhouw, N. L. & Schier, A. F. Bivalent histone modifications in early embryogenesis. Curr. Opin. Cell Biol. 24, 374–386 (2012).
Article CAS PubMed PubMed Central Google Scholar
Margueron, R. & Reinberg, D. The Polycomb complex PRC2 and its mark in life. Nature 469, 343–349 (2011).
Article CAS PubMed PubMed Central Google Scholar
Cela, I., Di Matteo, A. & Federici, L. Nucleophosmin in Its Interaction with ligands. Int. J. Mol. Sci. 21, 4885 (2020).
Article CAS PubMed PubMed Central Google Scholar
Iarovaia, O. V. et al. Nucleolus: a central hub for nuclear functions. Trends Cell Biol. 29, 647–659 (2019).
Article CAS PubMed Google Scholar
Sauvageau, M. et al. Multiple knockout mouse models reveal lincRNAs are required for life and brain development. eLife 2, e01749 (2013).
Article PubMed PubMed Central Google Scholar
Andersen, R. E. et al. The long noncoding RNA Pnky is a trans-acting regulator of cortical development in vivo. Dev. Cell 49, 632–642 (2019).
Article CAS PubMed PubMed Central Google Scholar
Grote, P. et al. The tissue-specific lncRNA Fendrr is an essential regulator of heart and body wall development in the mouse. Dev. Cell 24, 206–214 (2013).
Article CAS PubMed PubMed Central Google Scholar
Li, X. & Fu, X. D. Chromatin-associated RNAs as facilitators of functional genomic interactions. Nat. Rev. Genet. 20, 503–519 (2019).
Article CAS PubMed PubMed Central Google Scholar
Brangwynne, C. P., Mitchison, T. J. & Hyman, A. A. Active liquid-like behavior of nucleoli determines their size and shape in Xenopus laevis oocytes. Proc. Natl Acad. Sci. USA 108, 4334–4339 (2011).
Article CAS PubMed PubMed Central Google Scholar
Mitrea, D. M. et al. Nucleophosmin integrates within the nucleolus via multi-modal interactions with proteins displaying R-rich linear motifs and rRNA. eLife 5, e13571 (2016).
Article PubMed PubMed Central Google Scholar
Mao, Y. S., Zhang, B. & Spector, D. L. Biogenesis and function of nuclear bodies. Trends Genet. 27, 295–306 (2011).
Article CAS PubMed PubMed Central Google Scholar
Chujo, T., Yamazaki, T. & Hirose, T. Architectural RNAs (arcRNAs): a class of long noncoding RNAs that function as the scaffold of nuclear bodies. Biochim. Biophys. Acta 1859, 139–146 (2016).
Article CAS PubMed Google Scholar
Quinn, J. J. & Chang, H. Y. Unique features of long non-coding RNA biogenesis and function. Nat. Rev. Genet. 17, 47–62 (2016).
Article CAS PubMed Google Scholar
Tripathi, V. et al. The nuclear-retained noncoding RNA MALAT1 regulates alternative splicing by modulating SR splicing factor phosphorylation. Mol. Cell 39, 925–938 (2010).
Article CAS PubMed PubMed Central Google Scholar
Chujo, T. & Hirose, T. Nuclear bodies built on architectural long noncoding RNAs: unifying principles of their construction and function. Mol. Cells 40, 889–896 (2017).
留言 (0)