1. Griffin, JE, Gawronski, JD, DeJesus, MA, Ioerger, TR, Akerley, BJ, Sassetti, CM. High-resolution phenotypic profiling defines genes essential for mycobacterial growth and cholesterol catabolism. PLoS pathogens. 2011;7(9):e1002251.
Google Scholar | Crossref | Medline | ISI2. World Health Organization . Global tuberculosis report 2017. In: Global Tuberculosis Report 2017. World Health Organization; 2017.
Google Scholar3. Ansari, A, Hasan, Z, Dawood, G, Hussain, R. Differential combination of cytokine and interferon-γ+ 874 T/A polymorphisms determines disease severity in pulmonary tuberculosis. PLoS One. 2011;6(11):e27848.
Google Scholar | Crossref | Medline4. Vásquez-Loarte, T, Trubnykova, M, Guio, H. Genetic association meta-analysis: a new classification to assess ethnicity using the association of MCP-1-2518 polymorphism and tuberculosis susceptibility as a model. BMC Genet. 2015;16(1):128.
Google Scholar | Crossref | Medline5. Awoniyi, DO, Teuchert, A, Sutherland, JS, et al. Evaluation of cytokine responses against novel Mtb antigens as diagnostic markers for TB disease. J Infect. 2016;73(3):219–230.
Google Scholar | Crossref | Medline6. Lykouras, D, Sampsonas, F, Kaparianos, A, Karkoulias, K, Tsoukalas, G, Spiropoulos, K. Human genes in TB infection: their role in immune response. Monaldi Arch Chest Dis. 2016;69(1):24–31.
Google Scholar | Crossref7. Mendez, S, Hatem, CL, Kesavan, AK, et al. Susceptibility to tuberculosis: composition of tuberculous granulomas in Thorbecke and outbred New Zealand White rabbits. Vet Immunol Immunopathol. 2008;122(1-2):167–174.
Google Scholar | Crossref | Medline8. Bellamy, R . Susceptibility to mycobacterial infections: the importance of host genetics. Genes Immun. 2003;4(1):4–11.
Google Scholar | Crossref | Medline9. Mboowa, G . Tuberculosis and genetics of sub-Saharan Africa human population. J Mycobac Dis. 2014;4(164):1–6. doi:10.4172/2161-1068.1000164
Google Scholar10. Jorde, L, Watkins, W, Bamshad, M. Population genomics: a bridge from evolutionary history to genetic medicine. Hum Mol Genet. 2001;10(20):2199–2207.
Google Scholar | Crossref | Medline11. Jorde, LB, Watkins, WS, Bamshad, MJ, et al. The distribution of human genetic diversity: a comparison of mitochondrial, autosomal, and Y-chromosome data. Am J Human Genet. 2000;66(3):979–988.
Google Scholar | Crossref | Medline12. Meya, DB, McAdam, K. The TB pandemic: an old problem seeking new solutions. J Intern Med. 2007;261(4):309–329.
Google Scholar | Crossref | Medline13. Wei, Z, Wenhao, S, Yuanyuan, M, et al. A single nucleotide polymorphism in the interferon-γ gene (IFNG+ 874 T/A) is associated with susceptibility to tuberculosis. Oncotarget. 2017;8(31):50415.
Google Scholar | Crossref | Medline14. Edwards, D, Forster, JW, Cogan, NO, Batley, J, Chagné, D. Single nucleotide polymorphism discovery. In: Association Mapping in Plants. Springer; 2007:53–76.
Google Scholar | Crossref15. Casas, LA, Gómez Gutiérrez, A. Association of genetic polymorphisms of TNF-a and IL-10, regulatory cytokines of the immune response, in infectious, allergic and autoimmune diseases. Infectio. 2008;12(1):38–53.
Google Scholar16. Wiens, GD, Glenney, GW. Origin and evolution of TNF and TNF receptor superfamilies. Dev Comp Immunol. 2011;35(12):1324–1335.
Google Scholar | Crossref | Medline17. Varahram, M, Farnia, P, Nasiri, MJ, et al. Association of Mycobacterium Tuberculosis Lineages with IFN-γ and TNF-α Gene Polymorphisms among Pulmonary Tuberculosis Patient. Mediterr J Hematol Infect Dis. 2014;6(1):e2014015.
Google Scholar | Crossref | Medline18. Francisco, NM, Hsu, N-J, Keeton, R, et al. TNF-dependent regulation and activation of innate immune cells are essential for host protection against cerebral tuberculosis. J Neuroinflammation. 2015;12(1):125.
Google Scholar | Crossref | Medline19. Moscovis, SM, Gordon, AE, Al Madani, OM, et al. Genetic and environmental factors affecting TNF-α responses in relation to sudden infant death syndrome. Front Immunol. 2015;6:374.
Google Scholar | Crossref | Medline20. Valour, F, Perpoint, T, Sénéchal, A, et al. Interferon-γ autoantibodies as predisposing factor for nontuberculous mycobacterial infection. Emerg Infect Dis. 2016;22(6):1124.
Google Scholar | Crossref | Medline21. Rovetta, AI, Peña, D, Hernández Del Pino, RE, et al. IFNG-mediated immune responses enhance autophagy against mycobacterium tuberculosis antigens in patients with active tuberculosis. Autophagy. 2014;10(12):2109–2121.
Google Scholar | Crossref | Medline22. Gao, X, Chen, J, Tong, Z, et al. Interleukin-10 promoter gene polymorphisms and susceptibility to tuberculosis: a meta-analysis. PloS One. 2015;10(6):e0127496.
Google Scholar | Crossref | Medline23. Asgharzadeh, M, Ghorghanlu, S, Rashedi, J, et al. Association of promoter polymorphisms of interleukin-10 and interferon-gamma genes with tuberculosis in Azeri population of Iran. Iran J Allergy Asthma Immunol. 2016;15(3):167–173.
Google Scholar | Medline24. Chatterjee, S, Talaat, KR, van Seventer, EE, et al. Mycobacteria induce TPL-2 mediated IL-10 in IL-4-generated alternatively activated macrophages. PloS One. 2017;12(6):e0179701.
Google Scholar | Crossref | Medline25. Gaaib, JN, Nassief, AF, Al-Assi, A. Simple salting-out method for genomic DNA extraction from whole blood. Tikrit J Pure Sci. 2011;16(2):9–11.
Google Scholar26. Wang, T, Wang, L, Zhang, J, Dong, W. A simplified universal genomic DNA extraction protocol suitable for PCR. Genet Mol Res. 2011;10(1):519–525.
Google Scholar | Crossref | Medline27. Kurdistani, ZK, Saberi, S, Talebkhan, Y, et al. Distribution of cytokine gene single nucleotide polymorphisms among a multi-ethnic Iranian population. Adv Biomed Res. 2015;4:160.
Google Scholar | Crossref | Medline28. Sandhya, P, Danda, S, Danda, D, et al. Tumour necrosis factor (TNF)-α-308 gene polymorphism in Indian patients with Takayasu’s arteritis-a pilot study. Indian J Med Res. 2013;137(4):749.
Google Scholar | Medline29. Mira, JP, Cariou, A, Grall, F, et al. Association of TNF2, a TNF-α promoter polymorphism, with septic shock susceptibility and mortality: a multicenter study. JAMA. 1999;282(6):561–568.
Google Scholar | Crossref | Medline30. Tso, H, Ip, W, Chong, W, Tam, C, Chiang, A, Lau, Y. Association of interferon gamma and interleukin 10 genes with tuberculosis in Hong Kong Chinese. Genes Immun. 2005;6(4):358–363.
Google Scholar | Crossref | Medline31. Liang, B, Guo, Y, Li, Y. Association between IL-10 gene polymorphisms and susceptibility of tuberculosis: evidence based on a meta-analysis. PLoS One. 2014;9(2):e88448.
Google Scholar | Crossref | Medline32. López-Maderuelo, D, Arnalich, F, Serantes, R, et al. Interferon-γ and interleukin-10 gene polymorphisms in pulmonary tuberculosis. Am J Respir Crit Care Med. 2003;167(7):970–975.
Google Scholar | Crossref | Medline33. Hashemi, M, Sharifi-Mood, B, Nezamdoost, M, et al. Functional polymorphism of interferon-gamma (IFN-gamma) gene+ 874T/A polymorphism is associated with pulmonary tuberculosis in Zahedan, Southeast Iran. Prague Med Rep. 2011;112(1):38–43.
Google Scholar | Medline34. Thada, S, Ponnana, M, Sivangala, R, et al. Polymorphisms of IFN-γ (+ 874A/T) and IL-12 (+ 1188A/C) in tuberculosis patients and their household contacts in Hyderabad. India Human Immunol. 2016;77(7):559–565.
Google Scholar | Crossref | Medline35. Lee, SW, Chuang, TY, Huang, HH, et al. Interferon gamma polymorphisms associated with susceptibility to tuberculosis in a Han Taiwanese population. J Microbiol Immunol Infect. 2015;48(4):376–380.
Google Scholar | Crossref | Medline36. Vidyarani, M, Selvaraj, P, Prabhu Anand, S, Jawahar, M, Adhilakshmi, A, Narayanan, P. Interferon gamma (IFN-gamma) and interleukin-4 (IL-4) gene variants and cytokine levels in pulmonary tuberculosis. Indian J Med Res. 2006;124(Oct):403–410.
Google Scholar | Medline37. Meyer, CG, Intemann, CD, Förster, B, et al. No significant impact of IFN-γ pathway gene variants on tuberculosis susceptibility in a West African population. Eur J Hum Genet. 2016;24(5):748–755.
Google Scholar | Crossref | Medline38. Oral, HB, Budak, F, Uzaslan, EK, et al. Interleukin-10 (IL-10) gene polymorphism as a potential host susceptibility factor in tuberculosis. Cytokine. 2006;35(3):143–147.
Google Scholar | Crossref | Medline39. Oh, JH, Yang, CS, Noh, YK, et al. Polymorphisms of interleukin-10 and tumour necrosis factor-α genes are associated with newly diagnosed and recurrent pulmonary tuberculosis. Respirology. 2007;12(4):594–598.
Google Scholar | Crossref | Medline