Differences in gut microbial diversity and composition between growth phenotypes of farmed juvenile sandfish, Holothuria scabra

Leal MC, Sheridan C, Osinga R, Dioníasio G, Rocha RJM, Silva B, et al. Marine Microorganism-Invertebrate assemblages: perspectives to solve the Supply Problem in the initial steps of Drug Discovery. Mar Drugs. 2014;12:3929.

Article  CAS  PubMed  PubMed Central  Google Scholar 

Diwan AD, Harke SN, Gopalkrishna, Panche AN. Aquaculture industry prospective from gut microbiome of fish and shellfish: an overview. J Anim Physiol Anim Nutr (Berl). 2022;106:441–69.

Article  CAS  PubMed  Google Scholar 

Infante-Villamil S, Huerlimann R, Jerry DR. Microbiome diversity and dysbiosis in aquaculture. Rev Aquac. 2021;13:1077–96.

Article  Google Scholar 

Bogatyrenko EA, Buzoleva LS. Characterization of the gut bacterial community of the Japanese sea cucumber Apostichopus japonicus. Microbiol (Russian Federation). 2016;85:116–23.

CAS  Google Scholar 

Plotieau T, Lavitra T, Gillan DC, Eeckhaut I. Bacterial diversity of the sediments transiting through the gut of Holothuria scabra (Holothuroidea; Echinodermata). Mar Biol. 2013;160:3087–101.

Article  Google Scholar 

Zhang X, Nakahara T, Murase S, Nakata H, Inoue T, Kudo T. Physiological characterization of aerobic culturable bacteria in the intestine of the sea cucumber Apostichopus japonicus. J Gen Appl Microbiol. 2013;59:1–10.

Article  CAS  PubMed  Google Scholar 

Becker P, Gillan D, Lanterbecq D, Jangoux M, Rasolofonirina R, Rakotovao J, et al. The skin ulceration disease in cultivated juveniles of Holothuria scabra (Holothuroidea, Echinodermata). Aquaculture. 2004;242:13–30.

Article  Google Scholar 

Li H, Qiao G, Gu JQ, Zhou W, Li Q, Woo SH, et al. Phenotypic and genetic characterization of bacteria isolated from diseased cultured sea cucumber Apostichopus japonicus in northeastern China. Dis Aquat Organ. 2010;91:223–35.

Article  CAS  PubMed  Google Scholar 

Chi C, Liu JY, Fei SZ, Zhang C, Chang YQ, Liu XL, et al. Effect of intestinal autochthonous probiotics isolated from the gut of sea cucumber (Apostichopus japonicus) on immune response and growth of A. japonicus. Fish Shellfish Immunol. 2014;38:367–73.

Article  CAS  PubMed  Google Scholar 

Yan Fjun, Tian X, li, Dong S, lin, Fang Z, heng, Yang G. Growth performance, immune response, and disease resistance against Vibrio splendidus infection in juvenile sea cucumber Apostichopus japonicus fed a supplementary diet of the potential probiotic Paracoccus marcusii DB11. Aquaculture. 2014;420–421:105–11.

Article  Google Scholar 

Enomoto M, Nakagawa S, Sawabe T. Microbial communities associated with holothurians: Presence of unique bacteria in the coelomic fluid. Microbes Environ. 2012;27:300–5.

Article  PubMed  PubMed Central  Google Scholar 

Kim TY, Lee JJ, Kim BS, Choi SH. Whole-body microbiota of sea cucumber (Apostichopus japonicus) from South Korea for improved seafood management. J Microbiol Biotechnol. 2017;27:1753–62.

Article  CAS  PubMed  Google Scholar 

Pagán-Jiménez M, Ruiz-Calderón JF, Dominguez-Bello MG, García-Arrarás JE. Characterization of the intestinal microbiota of the sea cucumber Holothuria glaberrima. PLoS ONE. 2019;14:1–16.

Article  Google Scholar 

Zhang Z, Xing R, Lv Z, Shao Y, Zhang W, Zhao X, et al. Analysis of gut microbiota revealed Lactococcus garviaeae could be an indicative of skin ulceration syndrome in farmed sea cucumber Apostichopus japonicus. Fish Shellfish Immunol. 2018;80:148–54.

Article  PubMed  Google Scholar 

Feng Q-M, Ru X-S, Zhang L-B, Zhang S-Y, Yang H-S. Differences in feeding behavior and intestinal microbiota may relate to different growth rates of sea cucumbers (Apostichopus japonicus). Aquaculture. 2022;559:738368.

Article  Google Scholar 

Sha Y, Liu M, Wang B, Jiang K, Sun G, Wang L. Gut bacterial diversity of farmed sea cucumbers Apostichopus japonicus with different growth rates. Microbiol (Russian Federation). 2016;85:109–15.

CAS  Google Scholar 

Yamazaki Y, Sakai Y, Mino S, Sawabe T. An annual faecal 16S amplicon sequencing of individual sea cucumber (Apostichopus japonicus) demonstrates the feeding behaviours against eukaryotes in natural environments. Aquac Res. 2020;51:3602–8.

Article  CAS  Google Scholar 

Yamazaki Y, Meirelles PM, Mino S, Suda W, Oshima K, Hattori M, et al. Individual Apostichopus japonicus fecal microbiome reveals a link with polyhydroxybutyrate producers in host growth gaps. Sci Rep. 2016;6:1–10.

Article  Google Scholar 

Yang Y, Chen N, Chen T. Inference of environmental factor-microbe and microbe-microbe associations from Metagenomic Data using a hierarchical bayesian statistical model. Cell Syst. 2017;4:129–e1375.

Article  CAS  PubMed  Google Scholar 

Yang G, Peng M, Tian X, Dong S. Molecular ecological network analysis reveals the effects of probiotics and florfenicol on intestinal microbiota homeostasis: an example of sea cucumber. Sci Rep. 2017;7:1–12.

Google Scholar 

Wang L, Zhao X, Xu H, Bao X, Liu X, Chang Y, et al. Characterization of the bacterial community in different parts of the gut of sea cucumber (Apostichopus japonicus) and its variation during gut regeneration. Aquac Res. 2018;49:1987–96.

Article  CAS  Google Scholar 

Weigel BL. Sea cucumber intestinal regeneration reveals deterministic assembly of the gut microbiome. Appl Environ Microbiol. 2020;86:1–19.

Article  Google Scholar 

Zhang H, Wang Q, Liu S, Huo D, Zhao J, Zhang L, et al. Genomic and metagenomic insights into the microbial community in the regenerating intestine of the sea cucumber Apostichopus japonicus. Front Microbiol. 2019;10 JUN:1–11.

Google Scholar 

León-Palmero E, Joglar V, Álvarez PA, Martín-Platero A, Llamas I, Reche I. Diversity and antimicrobial potential in sea anemone and holothurian microbiomes. PLoS ONE. 2018;13:1–21.

Article  Google Scholar 

Purcell SW, Conand C, Uthicke S, Byrne M. Ecological roles of Exploited Sea cucumbers. Oceanogr Mar Biology. 2016;54:367–86.

Google Scholar 

Hamel JF, Eeckhaut I, Conand C, Sun J, Caulier G, Mercier A. Global knowledge on the commercial sea cucumber Holothuria scabra. Adv Mar Biol. 2022;91:1–286.

Article  PubMed  Google Scholar 

Hamel JF, Conand C, Pawson DL, Mercier A. The sea cucumber Holothuria scabra. Holothuroidea: Echinodermata; Its biology and exploitation as Beche-de-mer. 2001.

Purcell SW, Williamson DH, Ngaluafe P. Chinese market prices of beche-de-mer: implications for fisheries and aquaculture. Mar Policy. 2018;91:58–65.

Article  Google Scholar 

Siahaan EA, Pangestuti R, Munandar H, Kim SK. Cosmeceuticals properties of sea cucumbers: prospects and trends. Cosmetics. 2017;4:1–12.

Article  Google Scholar 

Hamel JF, Mercier A, Conand C, Purcell S, Toral-Granda T-G, Gamboa R. Holothuria scabra. The IUCN Red List of Threatened Species 2013. 2013. https://www.iucnredlist.org/species/180257/1606648. Accessed 17 Oct 2023.

Altamirano JP, Sinsona MJ, Caasi OJC, de la Torre-de la Cruz M, Uy WH, Noran-Baylon R, et al. Factors affecting the spatio-temporal variability in the production of sandfish Holothuria scabra juveniles in floating hapa ocean nursery systems. Aquaculture. 2021;541:736743.

Article  Google Scholar 

Altamirano JP, Noran-Baylon RD. Nursery culture of sandfish Holothuria scabra in sea-based floating hapa nets: effects of initial stocking density, size grading and net replacement frequency. Aquaculture. 2020;526:735379.

Article  Google Scholar 

Juinio-Meñez MA, de Peralta GM, Dumalan RJP, Edullantes CMA, Catbagan TO. Ocean nursery systems for scaling up juvenile sandfish (Holothuria scabra) production: ensuring opportunities for small fishers. In: Asia–Pacific Tropical Sea Cucumber Aquaculture. ACIAR Proceedings. Austrailian Centre for International Agricultural Research; 2012. pp. 57–62.

Yussuf YS, Yahya S. Stocking density, growth and survival rate of Post-settled juveniles of Holothuria scabra (Jaeger 1833) reared in an ocean-based floating Hapa. Tanzan J Sci. 2021.

Juinio-Meñez MA, Tech ED, Ticao IP, Gorospe JR, Edullantes CMA, Rioja RAV. Adaptive and integrated culture production systems for the tropical sea cucumber Holothuria scabra. Fish Res. 2017;186:502–13.

Article  Google Scholar 

Purcell SW, Hair CA, Mills DJ. Sea cucumber culture, farming and sea ranching in the tropics: Progress, problems and opportunities. Aquaculture. August 2012;2014:368–9.

Google Scholar 

Qiu T, Zhang L, Zhang T, Bai Y, Yang H. Effect of culture methods on individual variation in the growth of sea cucumber. Chin J Oceanol Limnol. 2014;32:737–42.

Article  Google Scholar 

Lv W, Zheng X, Kuang Y, Cao D, Yan Y, Sun X. QTL variations for growth-related traits in eight distinct families of common carp (Cyprinus carpio). BMC Genet. 2016;17:1–12.

Article  Google Scholar 

Salas-Leiton E, Anguís V, Rodríguez-Rua A, Cañavate JP. High stocking density and food restriction have minimum impact on size dispersal of cultured Senegalese sole (Solea senegalensis, Kaup 1858) juveniles. Evidence for individual growth being regulated by population structure. Aquac Eng. 2011;45:43–50.

Article  Google Scholar 

Xiong J, Dai W, Zhu J, Liu K, Dong C, Qiu Q. The underlying ecological processes of Gut Microbiota among Cohabitating Retarded, overgrown and normal shrimp. Microb Ecol. 2017;73:988–99.

Article  PubMed  Google Scholar 

Choi M-J, Oh YD, Kim YR, Lim HK, Kim J-M. Intestinal microbial diversity is higher in Pacific abalone (Haliotis discus hannai) with slower growth rates. Aquaculture. 2021;537:736500.

Article  CAS  Google Scholar 

Dai W, Dong Y, Ye J, Xue Q, Lin Z. Gut microbiome composition likely affects the growth of razor clam sinonovacula constricta. Aquaculture. 2022;550:737847.

留言 (0)

沒有登入
gif