Adrian A, Philippe P, Roeder R, Burley S (1994) Structure and function of the b/HLH/Z domain of USF. EMBO J 13(1):180–189. https://doi.org/10.1002/j.1460-2075.1994.tb06247.x
Arnaud N, Girin T, Sorefan K, Fuentes S, Wood TA, Lawrenson T, Sablowski R, stergaard L, (2010) Gibberellins control fruit patterning in Arabidopsis thaliana. Genes Dev 24(19):2127–2132. https://doi.org/10.1101/gad.593410
Article CAS PubMed PubMed Central Google Scholar
Buck M, Atchley W (2003) Phylogenetic Analysis of Plant Basic Helix-Loop-Helix Proteins. J Mol Evol 56(6):742–750. https://doi.org/10.1007/s00239-002-2449-3
Article CAS PubMed Google Scholar
Castillon A, Shen H, Huq E (2007) Phytochrome Interacting Factors: central players in phytochrome-mediated light signaling networks. Trends Plant Sci 12(11):514–521. https://doi.org/10.1016/j.tplants.2007.10.001
Article CAS PubMed Google Scholar
Chang S, Li Q, Huang B, Chen W, Tan H (2023) Genome-wide identification and characterisation of bHLH transcription factors in Artemisia annua. BMC Plant Biol 23(1):621–630. https://doi.org/10.1186/s12870-023-04063-8
Chen C, Chen H, Zhang Y, Thomas HR, Frank MH, He Y, Xia R (2020) TBtools: an integrative toolkit developed for interactive analyses of big biological data. Mol Plant 13(8):1194–1202. https://doi.org/10.1016/j.molp.2020.06.009
Article CAS PubMed Google Scholar
Chen J, Jiang L, Qian J, Qin H, Xu M, Fu J, Zhang C (2023) Screening and expression analysis of bHLH family IIIf subfamily genes in Centella asiatica. J Agric Biotechnol 31(1):61–72. https://doi.org/10.3969/j.issn.1674-7968.2023.01.006
Chen X, Yao C, Liu J, Liu J, Fang J, Deng H, Yao Q, Kang T, Guo X (2024) Basic helix-loop-helix (bHLH) gene family in rye (Secale cereale L.): genome-wide identification, phylogeny, evolutionary expansion and expression analyses. BMC Genom. https://doi.org/10.1186/s12864-023-09911-3
Cicirò Y, Sala A (2021) MYB oncoproteins: emerging players and potential therapeutic targets in human cancer. Oncogenesis 10(2):19. https://doi.org/10.1038/s41389-021-00309-y
Article CAS PubMed PubMed Central Google Scholar
Cui J, You C, Zhu E, Huang Q, Ma H, Chang F (2016) Feedback regulation of DYT1 by interactions with downstream bHLH factors promotes DYT1 nuclear localization and anther development. Plant Cell 28(5):1078–1093. https://doi.org/10.1105/tpc.15.00986
Article CAS PubMed PubMed Central Google Scholar
Fan M, Gao S, Yang Y, Yang S, Wang H, Shi L (2024) Genome-wide identification and expression analysis of the universal stress protein (USP) gene family in Arabidopsis thaliana, Zea mays, and Oryza sativa. Genetica 152(2):142–151. https://doi.org/10.1007/s10709-024-00209-0
Goossens J, Mertens J, Goossens A (2016) Role and functioning of bHLH transcription factors in jasmonate signalling. J Exp Bot 68(6):1333–1347. https://doi.org/10.1093/jxb/erw440
Hao Y, Zong X, Ren P, Qian Y, Fu A (2021) Basic Helix-loop-helix (bHLH) transcription factors regulate a wide range of functions in Arabidopsis. Int J Mol Sci 22(13):7152. https://doi.org/10.3390/ijms22137152
Article CAS PubMed PubMed Central Google Scholar
Heim M, Marc J, Martin W, Cathie M, Bernd W, Paul B (2003) The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity. Mol Biol Evol 20(5):735–747. https://doi.org/10.1093/molbev/msg088
Article CAS PubMed Google Scholar
Jiang H, Liu L, Shan X, Wen Z, Zhang X, Yao X, Niu G, Shan C, Sun D (2022) Genome-wide identification and expression analysis of the bHLH gene family in cauliflower (Brassica oleracea L.). Physiol Mol Biol Plants 28(9):1737–1751. https://doi.org/10.1007/s12298-022-01238-9
Article CAS PubMed PubMed Central Google Scholar
Jin C, Huang X, Li K, Yin H, Li L-T, Yao Z, Zhang S (2016) Overexpression of a bHLH1 transcription factor of pyrus ussuriensis confers enhanced cold tolerance and increases expression of stress-responsive genes. Front Plant Sci 7(2):126. https://doi.org/10.3389/fpls.2016.00441
Kondou Y, Nakazawa M, Kawashima M, Ichikawa T, Yoshizumi T, Suzuki K, Ishikawa A, Koshi T, Matsui R, Muto S, Matsui M (2008) RETARDED GROWTH OF EMBRYO1, a New basic helix-loop-helix protein, expresses in endosperm to control embryo growth. Plant Physiol 147(4):1924–1935. https://doi.org/10.1104/pp.108.118364
Article CAS PubMed PubMed Central Google Scholar
Kyoko K, Yusuke J, Hanae K, Eiichi M, Morifumi H, Osamu K, Hideharu S, Kazunori O, Hideaki N, YamaneHisakazu, (2005) Involvement of the basic helix-loop-helix transcription factor RERJ1 in wounding and drought stress responses in rice plants. Biosci Biotechnol Biochem 69(5):1042–1044. https://doi.org/10.1271/bbb.69.1042
Leivar P, Monte E, Al-Sady B, Carle C, Storer A, Alonso JM, Ecker JR, Quail PH (2008) The Arabidopsis phytochrome-interacting factor PIF7, together with PIF3 and PIF4, regulates responses to prolonged red light by modulating phyb levels. Plant Cell 20(2):337–352. https://doi.org/10.1105/tpc.107.052142
Article CAS PubMed PubMed Central Google Scholar
Li Y, Shan X, Gao R, Yang S, Wang S, Gao X, Wang L (2016) Two IIIf Clade-bHLHs from freesia hybrida play divergent roles in flavonoid biosynthesis and trichome formation when ectopically expressed in Arabidopsis. Sci Rep 6(1):30514. https://doi.org/10.1038/srep30514
Article CAS PubMed PubMed Central Google Scholar
Li J, Wang T, Han J, Ren Z (2020) Genome-wide identification and characterization of cucumber bHLH family genes and the functional characterization of CsbHLH041 in NaCl and ABA tolerance in Arabidopsis and cucumber. BMC Plant Biol 20(1):272. https://doi.org/10.1186/s12870-020-02440-1
Article CAS PubMed PubMed Central Google Scholar
Li M, Sun L, Gu H, Cheng D, Guo X, Chen R, Wu Z, Jiang J, Fan X, Chen J (2021) Genome-wide characterization and analysis of bHLH transcription factors related to anthocyanin biosynthesis in spine grapes (Vitis davidii). Sci Rep 11(1):6863. https://doi.org/10.1038/s41598-021-85754-w
Article CAS PubMed PubMed Central Google Scholar
Liang J, Fang Y, An C, Yao Y, Wang X, Zhang W, Liu R, Wang L, Aslam M, Cheng Y, Qin Y, Zheng P (2023) Genome-wide identification and expression analysis of the bHLH gene family in passion fruit (Passiflora edulis) and its response to abiotic stress. Int J Biol Macromol 225(15):389–403. https://doi.org/10.1016/j.ijbiomac.2022.11.076
Article CAS PubMed Google Scholar
Liu J, Xiang L, Liu X, Li X, Yin X, Grierson D, Li F, Chen K (2015) A Novel bHLH transcription factor involved in regulating anthocyanin biosynthesis in chrysanthemums (Chrysanthemum morifolium ramat.). PLoS ONE 10(11):e0143892. https://doi.org/10.1371/journal.pone.0143892
Article CAS PubMed PubMed Central Google Scholar
Liu Q, Wen J, Wang S, Chen J, Sun Y, Liu Q, Li X, Dong S (2023a) Genome-wide identification, expression analysis, and potential roles under low-temperature stress of bHLH gene family in Prunus sibirica. Front Plant Sci 14(6):1267107. https://doi.org/10.3389/fpls.2023.1267107
Article PubMed PubMed Central Google Scholar
Liu Y, Lin L, Liu Y, Mo Q, Zhang D, Li W, Xiong X, Yu X, Li Y (2023b) Genome-wide analysis of the bHLH gene family in Loropetalum chinense var rubrum: identification, classification, evolution, and diversity of expression patterns under cultivation. Plants 12(19):3392. https://doi.org/10.3390/plants12193392
Article CAS PubMed PubMed Central Google Scholar
Ma J, Zhang G, Ye Y, Shang L, Hong S, Ma Q, Zhao Y, Gu C (2022) Genome-wide identification and expression analysis of HSF transcription factors in Alfalfa (Medicago sativa) under Abiotic Stress. Plants 11(20):2763. https://doi.org/10.3390/plants11202763
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