Comparison of two crystal polymorphs of NowGFP reveals a new conformational state trapped by crystal packing

References

First citationAalten, D. M. F. van, Conn, D. A., de Groot, B. L., Berendsen, H. J. C., Findlay, J. B. C. & Amadei, A. (1997). Biophys. J. 73, 2891–2896.  PubMed Web of Science Google Scholar
First citationAalten, D. M. F. van, Crielaard, W., Hellingwerf, K. J. & Joshua-Tor, L. (2000). Protein Sci. 9, 64–72.  Web of Science PubMed Google Scholar
First citationAgirre, J., Atanasova, M., Bagdonas, H., Ballard, C. B., Baslé, A., Beilsten-Edmands, J., Borges, R. J., Brown, D. G., Burgos-Mármol, J. J., Berrisford, J. M., Bond, P. S., Caballero, I., Catapano, L., Chojnowski, G., Cook, A. G., Cowtan, K. D., Croll, T. I., Debreczeni, J. É., Devenish, N. E., Dodson, E. J., Drevon, T. R., Emsley, P., Evans, G., Evans, P. R., Fando, M., Foadi, J., Fuentes-Montero, L., Garman, E. F., Gerstel, M., Gildea, R. J., Hatti, K., Hekkelman, M. L., Heuser, P., Hoh, S. W., Hough, M. A., Jenkins, H. T., Jiménez, E., Joosten, R. P., Keegan, R. M., Keep, N., Krissinel, E. B., Kolenko, P., Kovalevskiy, O., Lamzin, V. S., Lawson, D. M., Lebedev, A. A., Leslie, A. G. W., Lohkamp, B., Long, F., Malý, M., McCoy, A. J., McNicholas, S. J., Medina, A., Millán, C., Murray, J. W., Murshudov, G. N., Nicholls, R. A., Noble, M. E. M., Oeffner, R., Pannu, N. S., Parkhurst, J. M., Pearce, N., Pereira, J., Perrakis, A., Powell, H. R., Read, R. J., Rigden, D. J., Rochira, W., Sammito, M., Sánchez Rodríguez, F., Sheldrick, G. M., Shelley, K. L., Simkovic, F., Simpkin, A. J., Skubak, P., Sobolev, E., Steiner, R. A., Stevenson, K., Tews, I., Thomas, J. M. H., Thorn, A., Valls, J. T., Uski, V., Usón, I., Vagin, A., Velankar, S., Vollmar, M., Walden, H., Waterman, D., Wilson, K. S., Winn, M. D., Winter, G., Wojdyr, M. & Yamashita, K. (2023). Acta Cryst. D79, 449–461.  Web of Science CrossRef IUCr Journals Google Scholar
First citationChudakov, D. M., Matz, M. V., Lukyanov, S. & Lukyanov, K. A. (2010). Physiol. Rev. 90, 1103–1163.  Web of Science CrossRef CAS PubMed Google Scholar
First citationDasgupta, S., Iyer, G. H., Bryant, S. H., Lawrence, C. E. & Bell, J. A. (1997). Proteins, 28, 494–514.  CrossRef CAS PubMed Google Scholar
First citationEmsley, P., Lohkamp, B., Scott, W. G. & Cowtan, K. (2010). Acta Cryst. D66, 486–501.  Web of Science CrossRef CAS IUCr Journals Google Scholar
First citationGerlits, O., Ho, K. Y., Cheng, X., Blumenthal, D., Taylor, P., Kovalevsky, A. & Radić, Z. (2019). Chem. Biol. Interact. 309, 108698.  CrossRef PubMed Google Scholar
First citationHenderson, R. (1990). Proc. R. Soc. Lond. B, 241, 6–8.  CrossRef CAS Web of Science Google Scholar
First citationHuang, J. R., Craggs, T. D., Christodoulou, J. & Jackson, S. E. (2007). J. Mol. Biol. 370, 356–371.   CrossRef PubMed CAS Google Scholar
First citationJanin, J. & Rodier, F. (1995). Proteins, 23, 580–587.  CrossRef CAS PubMed Web of Science Google Scholar
First citationJiang, Y., Lu, G., Trescott, L. R., Hou, Y., Guan, X., Wang, S., Stamenkovich, A., Brunzelle, J., Sirinupong, N., Li, C. & Yang, Z. (2013). PLoS One, 8, e81904.  CrossRef PubMed Google Scholar
First citationKrissinel, E. & Henrick, K. (2005). Computational Life Sciences, edited by M. R. Berthold, R. C. Glen, K. Diederichs, O. Kohlbacher & I. Fischer, pp. 163–174. Berlin, Heidelberg: Springer.  Google Scholar
First citationKrissinel, E. & Henrick, K. (2007). J. Mol. Biol. 372, 774–797.  Web of Science CrossRef PubMed CAS Google Scholar
First citationLaricheva, E. N., Goh, G. B., Dickson, A. & Brooks, C. L. III (2015). J. Am. Chem. Soc. 137, 2892–2900.  CrossRef CAS PubMed Google Scholar
First citationMatthews, B. W. (1968). J. Mol. Biol. 33, 491–497.  CrossRef CAS PubMed Web of Science Google Scholar
First citationMcPherson, A. (1982). Preparation and Analysis of Protein Crystals. Chichester: John Wiley & Sons.  Google Scholar
First citationMurshudov, G. N., Skubák, P., Lebedev, A. A., Pannu, N. S., Steiner, R. A., Nicholls, R. A., Winn, M. D., Long, F. & Vagin, A. A. (2011). Acta Cryst. D67, 355–367.  Web of Science CrossRef CAS IUCr Journals Google Scholar
First citationOtwinowski, Z. & Minor, W. (1997). Methods Enzymol. 276, 307–326.  CrossRef CAS PubMed Web of Science Google Scholar
First citationPletnev, V. Z., Pletneva, N. V., Sarkisyan, K. S., Mishin, A. S., Lukyanov, K. A., Goryacheva, E. A., Ziganshin, R. H., Dauter, Z. & Pletnev, S. (2015). Acta Cryst. D71, 1699–1707.  Web of Science CrossRef IUCr Journals Google Scholar
First citationRizzo, M. A., Springer, G. H., Granada, B. & Piston, D. W. (2004). Nat. Biotechnol. 22, 445–449.  CrossRef PubMed CAS Google Scholar
First citationSarkisyan, K. S., Goryashchenko, A. S., Lidsky, P. V., Gorbachev, D. A., Bozhanova, N. G., Gorokhovatsky, A. Y., Pereverzeva, A. R., Ryumina, A. P., Zherdeva, V. V., Savitsky, A. P., Solntsev, K. M., Bommarius, A. S., Sharonov, G. V., Lindquist, J. R., Drobizhev, M., Hughes, T. E., Rebane, A., Lukyanov, K. A. & Mishin, A. S. (2015). Biophys. J. 109, 380–389.  CrossRef CAS PubMed Google Scholar
First citationSarkisyan, K. S., Yampolsky, I. V., Solntsev, K. M., Lukyanov, S. A., Lukyanov, K. A. & Mishin, A. S. (2012). Sci. Rep. 2, 608.  Web of Science CrossRef PubMed Google Scholar
First citationSeifert, M. H., Georgescu, J., Ksiazek, D., Smialowski, P., Rehm, T., Steipe, B. & Holak, T. A. (2003). Biochemistry, 42, 2500–2512.  Web of Science CrossRef PubMed CAS Google Scholar
First citationVagin, A. & Teplyakov, A. (2010). Acta Cryst. D66, 22–25.  Web of Science CrossRef CAS IUCr Journals Google Scholar
First citationVaney, M. C., Broutin, I., Retailleau, P., Douangamath, A., Lafont, S., Hamiaux, C., Prangé, T., Ducruix, A. & Riès-Kautt, M. (2001). Acta Cryst. D57, 929–940.  Web of Science CrossRef CAS IUCr Journals Google Scholar
First citationYamada, K. D., Kunishima, N., Matsuura, Y., Nakai, K., Naitow, H., Fukasawa, Y. & Tomii, K. (2017). Acta Cryst. D73, 757–766.  CrossRef IUCr Journals Google Scholar
First citationZhang, X. J., Wozniak, J. A. & Matthews, B. W. (1995). J. Mol. Biol. 250, 527–552.  CrossRef CAS PubMed Web of Science Google Scholar

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