Abbas HH, Soliman WS, Elgendy MY, Youins NA, Abu-Elala NM, Marzouk MS (2022) Insight on the potential microbial causes of summer mortality syndrome in the cultured Nile tilapia (Oreochromis niloticus). Egypt J Aquat Biol Fish 26:133

Article  Google Scholar 

Abdel Rahman AN, Amer SA, Behairy A, Younis EM, Abdelwarith AA, Osman A, Moustafa AA, Davies SJ, Ibrahim RE (2023a) Using Azadirachta indica protein hydrolysate as a plant protein in Nile tilapia (Oreochromis niloticus) diet: Effects on the growth, economic efficiency, antioxidant-immune response and resistance to Streptococcus agalactiae. J Anim Physiol Anim Nutr 2023: 1–15

Google Scholar 

Abdel Rahman AN, Abdelwarith AA, Younis EM, Rhouma NR, Zaki HT, Khalil SS, El-Saber MM, Davies SJ, El-Murr A, Ibrahim RE (2023b) The alleviative effects of green synthesized copper oxide nanoparticles against oxidative stress, hepato-renal alterations, and immune suppression induced by Staphylococcus aureus infection in Clarias gariepinus. Aquac Rep 32:101746

Article  Google Scholar 

Abdel Rahman AN, Masoud SR, Fouda MM, Abdelwarith AA, Younis EM, Khalil SS, Zaki HT, Mohammed E, Davies SJ, Ibrahim RE (2023c) Antimicrobial efficacy of magnetite nanoparticles against Aeromonas sobria challenge in African catfish: biochemical, protein profile, and immuno-antioxidant indices. Aquac Rep 32:101692

Article  Google Scholar 

Abdel Rahman AN, Ismail SH, Fouda MM, Abdelwarith AA, Younis EM, Khalil SS, El-Saber MM, Abdelhamid AE, Davies SJ, Ibrahim RE (2023d) Impact of streptococcus agalactiae challenge on immune response, antioxidant status and hepatorenal indices of Nile Tilapia: the palliative role of chitosan white poplar nanocapsule. Fishes 8:199

Article  Google Scholar 

Aditi FY, Rahman SS, Hossain MM (2017) A study on the microbiological status of mineral drinking water. Open Microbiol J 11:31

Article  CAS  PubMed  PubMed Central  Google Scholar 

Al-azeem A, Mohamed W, Younis W (2023) Microbiological and molecular characterization of Vibrio Cholera and Vibrio parahaemolyticus isolated from Tilapia fish (Oreochromis niloticus). SVU Int J Vet Sci 6:1–16

Google Scholar 

Ali MM, Sahar T, Firyal S, Ijaz M, Majeed KA, Awan F, Adil M, Akbar H, Rashid MI, Ciğerci İH (2022a) Assessment of cytotoxic, genotoxic, and oxidative stress of dibutyl phthalate on cultured bovine peripheral lymphocytes. Oxid Med Cell Longev 2022: 9961513

Article  PubMed  PubMed Central  Google Scholar 

Ali SE, Mahana O, Mohan CV, Delamare-Deboutteville J, Elgendy MY (2022b) Genetic characterization and antimicrobial profiling of bacterial isolates collected from Nile tilapia (Oreochromis niloticus) affected by summer mortality syndrome. J Fish Dis 45:1857–1871

Article  CAS  PubMed  Google Scholar 

Alleway HK, Waters TJ, Brummett R, Cai J, Cao L, Cayten MR, Costa-Pierce BA, Dong Y-W, Brandstrup Hansen SC, Liu S, Qing L, Colin S, Seth JT, Lisa T, Yue W, Robert CJ (2023) Global principles for restorative aquaculture to foster aquaculture practices that benefit the environment. Conserv Sci Pract 5:e12982

Article  Google Scholar 

Aly SM, Abdel-Galil Ahmed Y, Abdel-Aziz Ghareeb A, Mohamed MF (2008) Studies on Bacillus subtilis and Lactobacillus acidophilus, as potential probiotics, on the immune response and resistance of Tilapia nilotica (Oreochromis niloticus) to challenge infections. Fish Shellfish Immunol 25:128–136

Article  CAS  PubMed  Google Scholar 

APHA (2005) Standard methods for the examination of water and wastewater, 21th edn. American Public Health Association, American Water Works Association, Water Pollution Control Federation. New York, pp 1–8

Assefa A, Abunna F (2018) Maintenance of fish health in aquaculture: review of epidemiological approaches for prevention and control of infectious disease of fish. Vet Med Int 2018: 5432497

Article  PubMed  PubMed Central  Google Scholar 

Awuor SO, Omwenga EO, Daud F (2020) Geographical distribution and antibiotics susceptibility patterns of toxigenic Vibrio cholerae isolates from Kisumu County, Kenya. Afr J Prim Health Care Fam Med 12:1–6

Article  Google Scholar 

Balcázar JL, Rojas-Luna T (2007) Inhibitory activity of probiotic Bacillus subtilis UTM 126 against Vibrio Species Confers Protection Against Vibriosis in Juvenile shrimp (Litopenaeus vannamei). Curr Microbiol 55:409–412

Article  PubMed  Google Scholar 

Bondad-Reantaso MG, MacKinnon B, Karunasagar I, Fridman S, Alday‐Sanz V, Brun E, Le Groumellec M, Li A, Surachetpong W, Karunasagar I (2023) Review of alternatives to antibiotic use in aquaculture. Rev Altern Antibiotic use Aquaculture Rev Aquac 15:1421–1451

Google Scholar 

CCoA C (2005) Canadian council on animal care guidelines on: the care and use of fish in research. Teaching and testing. Ottawa

Chan JT, Kadri S, Köllner B, Rebl A, Korytář T (2022) RNA-Seq of single fish cells–seeking out the leukocytes mediating immunity in Teleost Fishes. Front Immunol 13:798712

Article  CAS  PubMed  PubMed Central  Google Scholar 

Chaurasia B, Pandey A, Palni LMS, Trivedi P, Kumar B, Colvin N (2005) Diffusible and volatile compounds produced by an antagonistic Bacillus subtilis strain cause structural deformations in pathogenic fungi in vitro. Microbiol Res 160:75–81

Article  CAS  PubMed  Google Scholar 

Chen YY, Cheng AC, Cheng SA, Chen JC (2018) Orange-spotted grouper Epinephelus coioides that have encountered low salinity stress have decreased cellular and humoral immune reactions and increased susceptibility to Vibrio alginolyticus. Fish Shellfish Immunol 80:392–396

Article  CAS  PubMed  Google Scholar 

da Silva EB, da Silva Corrêa SA, de Souza Abessa DM, da Silva BFX, Rivero DHRF, Seriani R (2018) Mucociliary transport, differential white blood cells, and cyto-genotoxicity in peripheral erythrocytes in fish from a polluted urban pond. Environ Sci Pollut Res Int 25:2683–2690

Article  PubMed  Google Scholar 

Dafale NA, Srivastava S, Purohit H (2020) Zoonosis: an emerging link to antibiotic resistance under one health approach. Indian J Microbiol 60:139–152

Article  PubMed  PubMed Central  Google Scholar 

Di J, Chu Z, Zhang S, Huang J, Du H, Wei Q (2019) Evaluation of the potential probiotic Bacillus subtilis isolated from two ancient sturgeons on growth performance, serum immunity and disease resistance of Acipenser dabryanus. Fish Shellfish Immunol 93:711–719

Article  CAS  PubMed  Google Scholar 

Dong H, Chen Y, Wang J, Zhang Y, Zhang P, Li X, Zou J, Zhou A (2021) Interactions of microplastics and antibiotic resistance genes and their effects on the aquaculture environments. J Hazard Mater Lett 403:123961

Article  CAS  Google Scholar 

DrablÖs F, Nicholson DG, RÖnning MJBBA-PS, Enzymology M (1999) EXAFS study of zinc coordination in bacitracin A. Biochim Biophys Acta 1431:433–442

Article  PubMed  Google Scholar 

El-Sayed A-FM, Fitzsimmons K (2023) From Africa to the world—the journey of Nile tilapia. Revi Aquac 15:6–21

Article  Google Scholar 

Elgendy MY, Abdelsalam M, Kenawy AM, Ali SE (2022) Vibriosis outbreaks in farmed Nile tilapia (Oreochromis niloticus) caused by Vibrio mimicus and V. Cholerae. Aquac Int 30:2661–2677

Article  CAS  Google Scholar 

Elkamel AA, Mosaad GM (2012) Immunomodulation of Nile Tilapia, Oreochromis niloticus, by Nigella sativa and Bacillus subtilis. J Aquac Res Dev 2012:3

Google Scholar 

Ellis A (1990) Lysozyme assays. Tech Fish Immunol 1:101–103

Google Scholar 

Enany M, Eidaroos N, Eltamimy N (2019) Microbial causes of summer mortality in farmed fish in Egypt. Suez Canal Vet Med J 24:45–56

Article  Google Scholar 

FAO (2022) Food and Agriculture Organization of the United Nations. The state of World fisheries and Aquaculture. Towards Blue Transformation, Rome

Google Scholar 

Ferraboschi P, Ciceri S, Grisenti P (2021) Applications of lysozyme, an innate immune defense factor, as an alternative antibiotic. Antibiotic 10:1534

Article  CAS  Google Scholar 

Flach EJ, LeNette-Dawson D, Greig DR, Ismail Ahmed A, Jenkins C, John SK, Macgregor SK, Masters N, Stidworthy MF, Zimmerman B, Chattaway MA (2020) Isolation and characterisation of Vibrio cholerae from fish examined postmortem at ZSL London Zoo between 2014 and 2018. Vet Rec 187:e86–e86

Article  PubMed  Google Scholar 

Gullian M, Thompson F, Rodriguez J (2004) Selection of probiotic bacteria and study of their immunostimulatory effect in Penaeus vannamei. Aquaculture 233:1–14

Article  Google Scholar 

Halpern M, Izhaki I (2017) Fish as hosts of Vibrio cholerae. 2017-February-28;8

Han Z, Sun J, Jiang B, Hu X, Lv A, Chen L, Guo Y (2021) Concurrent infections of Aeromonas veronii and Vibrio cholerae in Koi carp (Cyprinus carpio var. Koi). Aquaculture 535:736395

Article  CAS  Google Scholar 

Hasan KN, Banerjee G (2020) Recent studies on probiotics as beneficial mediator in aquaculture: a review. J Basic Appl Zool 81:1–16

Article  Google Scholar 

Hayes M (2023) Challenges regarding protein provision for the growing global population: improving the environmental impact of traditional protein supply chains and maximising use of coproducts and alternative, new resources. Glob Chall 7:2300059

Hazards EPB, Koutsoumanis K, Allende A, Álvarez-Ordóñez A, Bolton D, Bover‐Cid S, Chemaly M, Davies R, De Cesare A, Herman L (2021) Role played by the environment in the emergence and spread of antimicrobial resistance (AMR) through the food chain. EFSA J 19:e06651

Google Scholar 

Humphries R, Bobenchik AM, Hindler JA, Schuetz AN (2021) Overview of changes to the clinical and laboratory standards institute performance standards for antimicrobial susceptibility testing. J Clin Microbiol 59:213–221

Article  Google Scholar