Ackermann YS, Li W-J, Op De Hipt L, Niehoff P-J, Casey W, Polen T, Köbbing S, Ballerstedt H, Wynands B, O’connor K, Blank LM, Wierckx N (2021) Engineering adipic acid metabolism in Pseudomonas putida. Metab Eng 67:29–40
Aer L, Jiang Q, Gul I, Qi Z, Feng J, Tang L (2022) Overexpression and kinetic analysis of Ideonella sakaiensis PETase for polyethylene terephthalate (PET) degradation. Environ Res 212:113472
Anandharaj M, Lin Y-J, Rani RP, Nadendla EK, Ho M-C, Huang C-C, Cheng J-F, Chang J-J, Li W-H (2020) Constructing a yeast to express the largest cellulosome complex on the cell surface. Proc Natl Acad Sci 117(5):2385–2394
Antelava A, Damilos S, Hafeez S, Manos G, Al-Salem SM, Sharma BK, Kohli K, Constantinou A (2019) Plastic solid waste (PSW) in the context of life cycle assessment (LCA) and sustainable management. Environ Manag 64(2):230–244
Bååth JA, Borch K, Jensen K, Brask J, Westh P (2021) Comparative biochemistry of four polyester (PET) hydrolases**. ChemBioChem 22(9):1627–1637
Baek M, Anishchenko I, Humphreys IR, Cong Q, Baker D, Dimaio F (2023) Efficient and accurate prediction of protein structure using RoseTTAFold2. bioRxiv: 2023.2005.2024.54217
Bateman A (2019) UniProt: a worldwide hub of protein knowledge. Nucl Acids Res 47:D506–D515
Bayry J, Aimanianda V, Guijarro JI, Sunde M, Latgé JP (2012) Hydrophobins–unique fungal proteins. PLoS Pathog 8(5):e1002700
Beal J, Rogers M (2020) Levels of autonomy in synthetic biology engineering. Mol Syst Biol 16(12):e10019
Bell EL, Finnigan W, France SP, Green AP, Hayes MA, Hepworth LJ, Lovelock SL, Niikura H, Osuna S, Romero E, Ryan KS, Turner NJ, Flitsch SL (2021) Biocatal Nat Rev Methods Primers 1(1):46
Bell EL, Smithson R, Kilbride S, Foster J, Hardy FJ, Ramachandran S, Tedstone AA, Haigh SJ, Garforth AA, Day PJR, Levy C, Shaver MP, Green AP (2022) Directed evolution of an efficient and thermostable PET depolymerase. Nat Catal 5(8):673–681
Benavides Fernández CD, Guzmán Castillo MP, Quijano Pérez SA, Carvajal Rodríguez LV (2022) Microbial degradation of polyethylene terephthalate: a systematic review. SN Appl Sci 4(10):263
Bhak G, Méndez-Ardoy A, Escobedo A, Salvatella X, Montenegro J (2020) An adhesive peptide from the C-terminal domain of α-synuclein for single-layer adsorption of nanoparticles onto substrates. Bioconjug Chem 31(12):2759–2766
Billig S, Oeser T, Birkemeyer C, Zimmermann W (2010) Hydrolysis of cyclic poly (ethylene terephthalate) trimers by a carboxylesterase from thermobifida fusca KW3. Appl Microbiol Biotechnol 87(5):1753–1764
Blank LM, Narancic T, Mampel J, Tiso T, O’connor K (2020) Biotechnological upcycling of plastic waste and other non-conventional feedstocks in a circular economy. Curr Opin Biotechnol 62:212–219
Blázquez-Sánchez P, Engelberger F, Cifuentes-Anticevic J, Sonnendecker C, Griñén A, Reyes J, Díez B, Guixé V, Richter PK, Zimmermann W, Ramírez-Sarmiento CA (2022) Antarctic polyester hydrolases degrade aliphatic and aromatic polyesters at moderate temperatures. Appl Environ Microbiol 88(1):01842–11821
Boots B, Russell CW, Green DS (2019) Effects of microplastics in soil ecosystems: above and below ground. Environ Sci Technol 53(19):11496–11506
Brandenberg OF, Schubert OT, Kruglyak L (2022) Towards synthetic PETtrophy: engineering pseudomonas putida for concurrent polyethylene terephthalate (PET) monomer metabolism and PET hydrolase expression. Microb Cell Fact 21(1):119
Büscher N, Sayoga GV, Rübsam K, Jakob F, Schwaneberg U, Kara S, Liese A (2019) Biocatalyst immobilization by anchor peptides on an additively manufacturable material. Org Process Res Dev 23(9):1852–1859
Calero P, Nikel PI (2019) Chasing bacterial chassis for metabolic engineering: a perspective review from classical to non-traditional microorganisms. Microb Biotechnol 12(1):98–124
Carniel A, Santos AG, Júnior LSC, De Castro AM, Coelho MMAZ (2023) Biotransformation of ethylene glycol to glycolic acid by yarrowia lipolytica: a route for poly (ethylene terephthalate) (PET) upcycling. Biotechnol J 18(6):2200521
Castilla A, Giordano SR, Irazoqui G (2022) Microbial extremozymes. Academic Press, Cambridge, pp 207–222
Castro AMD, Carniel A, Stahelin D, Chinelatto Junior LS, Honorato HDA, De Menezes SMC (2019) High-fold improvement of assorted post-consumer poly (ethylene terephthalate) (PET) packages hydrolysis using humicola insolens cutinase as a single biocatalyst. Process Biochem 81:85–91
Chain PSG, Denef VJ, Konstantinidis KT, Vergez LM, Agulló L, Reyes VL, Hauser L, Córdova M, Gómez L, González M, Land M, Lao V, Larimer F, Lipuma JJ, Mahenthiralingam E, Malfatti SA, Marx CJ, Parnell JJ, Ramette A, Richardson P, Seeger M, Smith D, Spilker T, Sul WJ, Tsoi TV, Ulrich LE, Zhulin IB, Tiedje JM (2006) Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatility. Proc Natl Acad Sci 103(42):15280–15287
Chandra P, Enespa SR, Arora PK (2020) Microbial lipases and their industrial applications: a comprehensive review. Microb Cell Fact 19(1):169
Chen C-C, Han X, Li X, Jiang P, Niu D, Ma L, Liu W, Li S, Qu Y, Hu H, Min J, Yang Y, Zhang L, Zeng W, Huang J-W, Dai L, Guo R-T (2021) General features to enhance enzymatic activity of poly(ethylene terephthalate) hydrolysis. Nat Catal 4(5):425–430
Chen Z, Duan R, Xiao Y, Wei Y, Zhang H, Sun X, Wang S, Cheng Y, Wang X, Tong S, Yao Y, Zhu C, Yang H, Wang Y, Wang Z (2022) Biodegradation of highly crystallized poly(ethylene terephthalate) through cell surface codisplay of bacterial PETase and hydrophobin. Nat Commun 13(1):7138
Chew SY, Chee WJY, Than LTL (2019) The glyoxylate cycle and alternative carbon metabolism as metabolic adaptation strategies of candida glabrata: perspectives from Candida albicans and Saccharomyces cerevisiae. J Biomed Sci 26(1):52
Child J, Willetts A (1978) Microbial metabolism of aliphatic glycols bacterial metabolism of ethylene glycol. Biochim Biophys Acta (BBA) Gen Subj 538(2):316–327
Choi KY, Kim D, Sul WJ, Chae J-C, Zylstra GJ, Kim YM, Kim E (2005) Molecular and biochemical analysis of phthalate and terephthalate degradation by Rhodococcus sp. strain DK17. FEMS Microbiol Lett 252(2):207–213
Correddu D, Di Nardo G, Gilardi G (2021) Self-sufficient class VII cytochromes P450: from full-length structure to synthetic biology applications. Trends Biotechnol 39(11):1184–1207
Cui L, Qiu Y, Liang Y, Du C, Dong W, Cheng C, He B (2021a) Excretory expression of ispetase in E. coli by an enhancer of signal peptides and enhanced PET hydrolysis. Int J Biol Macromol 188:568–575
Cui Y, Chen Y, Liu X, Dong S, Tian YE, Qiao Y, Mitra R, Han J, Li C, Han X, Liu W, Chen Q, Wei W, Wang X, Du W, Tang S, Xiang H, Liu H, Liang Y, Houk KN, Wu B (2021b) Computational redesign of a PETase for plastic biodegradation under ambient condition by the GRAPE strategy. ACS Catal 11(3):1340–1350
Da Costa AM, De Oliveira LVR, Vidal L, Nicaud J-M, De Castro AM, Coelho MAZ (2020) Poly(ethylene terephthalate) (PET) degradation by yarrowia lipolytica: investigations on cell growth, enzyme production and monomers consumption. Process Biochem 95:81–90
Danso D, Schmeisser C, Chow J, Zimmermann W, Wei R, Leggewie C, Li X, Hazen T, Streit WR (2018) New insights into the function and global distribution of polyethylene terephthalate (PET)-degrading bacteria and enzymes in marine and terrestrial metagenomes. Appl Environ Microbiol 84(8):e02773-e12717
DeLano WL (2002) Pymol: an open-source molecular graphics tool. CCP4 Newsl Protein Crystallogr 40(1):82–92
Deng B, Yue Y, Yang J, Yang M, Xing Q, Peng H, Wang F, Li M, Ma L, Zhai C (2023) Improving the activity and thermostability of PETase from Ideonella sakaiensis through modulating its post-translational glycan modification. Commun Biol 6(1):39
Diao J, Hu Y, Tian Y, Carr R, Moon TS (2023) Upcycling of poly (ethylene terephthalate) to produce high-value bio-products. Cell Rep 42(1):111908
Ding Z, Xu G, Miao R, Wu N, Zhang W, Yao B, Guan F, Huang H, Tian J (2023) Rational redesign of thermophilic PET hydrolase LCCICCG to enhance hydrolysis of high crystallinity polyethylene terephthalates. J Hazard Mater 453:131386
Dittrich J, Brethauer C, Goncharenko L, Bührmann J, Zeisler-Diehl V, Pariyar S, Jakob F, Kurkina T, Schreiber L, Schwaneberg U, Gohlke H (2022) Rational design yields molecular insights on leaf-binding of anchor peptides. ACS Appl Mater Interfaces 14(25):28412–28426
Eberl A, Heumann S, Brückner T, Araujo R, Cavaco-Paulo A, Kaufmann F, Kroutil W, Guebitz GM (2009) Enzymatic surface hydrolysis of poly(ethylene terephthalate) and bis(benzoyloxyethyl) terephthalate by lipase and cutinase in the presence of surface active molecules. J Biotechnol 143(3):207–212
Eiamthong B, Meesawat P, Wongsatit T, Jitdee J, Sangsri R, Patchsung M, Aphicho K, Suraritdechachai S, Huguenin-Dezot N, Tang S, Suginta W, Paosawatyanyong B, Babu MM, Chin JW, Pakotiprapha D, Bhanthumnavin W, Uttamapinant C (2022) Discovery and genetic code expansion of a polyethylene terephthalate (PET) hydrolase from the human saliva metagenome for the degradation and bio-functionalization of PET. Angew Chem Int Ed Engl 61(37):e202203061
Erickson E, Gado JE, Avilán L, Bratti F, Brizendine RK, Cox PA, Gill R, Graham R, Kim D-J, König G, Michener WE, Poudel S, Ramirez KJ, Shakespeare TJ, Zahn M, Boyd ES, Payne CM, Dubois JL, Pickford AR, Beckham GT, Mcgeehan JE (2022) Sourcing thermotolerant poly(ethylene terephthalate) hydrolase scaffolds from natural diversity. Nat Commun 13(1):7850
留言 (0)