Repetitive DNAs and chromosome evolution in Megaleporinus obtusidens and M. reinhardti (Characiformes: Anostomidae)

Bachtrog D (2008) The temporal dynamics of processes underlying Y chromosome degeneration. Genetics 179:1513–1525. https://doi.org/10.1534/genetics.107.084012

Article  PubMed  PubMed Central  Google Scholar 

Bachtrog D, Mank JE, Peichel CL, Kirkpatrick M, Otto SP, Ashman T, Hahn MW, Kitano J, Mayrose I, Ming R, Perrin N, Ross L, Valenzuela N, Vamosi JC (2014) Sex determination: why so many ways of doing it? PLoS Biol 12:e1001899. https://doi.org/10.1371/journal.pbio.1001899

Article  CAS  PubMed  PubMed Central  Google Scholar 

Bertollo LAC, Cioffi MB, Moreira-Filho O (2015) Direct chromosome preparation from freshwater teleost fishes. In: Ozouf-Costaz C, Pisano E, Foresti F, Almeida Toledo LF (eds) Fish Cytogenetic techniques (chondrichthyans and teleosts). CRC, Boca Raton, pp 21–26

Google Scholar 

Biscotti MA, Olmo E, Heslop-Harrison JSP (2015) Repetitive DNA in eukaryotic genomes. Chromosome Res 23:415–420. https://doi.org/10.1007/s10577-015-9499-z

Article  CAS  PubMed  Google Scholar 

Bitencourt JA, Sampaio I, Ramos RT, Affonso PRAM (2014) Chromosomal fusion in Brazilian populations of Trinectes inscriptus Gosse, 1851 (Pleuronectiformes; Achiridae) as revealed by internal telomere sequences (ITS). J Exp Mar Biol Ecol 452:101–104. https://doi.org/10.1016/j.jembe.2013.12.012

Article  CAS  Google Scholar 

Carducci F, Barucca M, Canapa A, Biscotti MA (2018) Rex retroelements and teleost genomes: an overview. Int J Mol Sci 19:e3653. https://doi.org/10.3390/ijms19113653

Article  CAS  Google Scholar 

Charlesworth B (1991) The evolution of sex chromosomes. Science 251:1030–1033. https://www.science.org/doi/10.1126/science.1998119

Article  CAS  PubMed  Google Scholar 

Crepaldi C, Parise-Maltempi PP (2020) Heteromorphic sex chromosomes and their DNA content in Fish: an insight through satellite DNA accumulation in Megaleporinus Elongatus. Cytogenet Genome Res 160:38–46. https://doi.org/10.1159/000506265

Article  CAS  PubMed  Google Scholar 

Deon GA, Glugoski L, Sassi FMC, Hatanaka T, Nogaroto V, Bertollo LAC, Liehr T, Al-Rikabi A, Moreira Filho O, Cioffi MB, Vicari MR (2022a) Chromosomal rearrangements and origin of the multiple XX/XY1Y2 sex chromosome system in Harttia species (Siluriformes: Loricariidae). Front Genet 13:e877522. https://doi.org/10.3389/fgene.2022.877522

Article  CAS  Google Scholar 

Deon GA, Glugoski L, Hatanaka T, Sassi FMC, Nogaroto V, Bertollo LAC, Liehr T, Al-Rikabi A, Moreira Filho O, Cioffi MB, Vicari MR (2022b) Evolutionary breakpoint regions and chromosomal remodeling in Harttia (Siluriformes: Loricariidae) species diversification. Genet Mol Biol 45(2):e20210170. https://doi.org/10.1590/1678-4685-GMB-2021-0170

Article  CAS  PubMed  PubMed Central  Google Scholar 

Dulz TA, Azambuja M, Nascimento VD, Lorscheider CA, Noleto RB, Moreira-Filho O, Nogaroto V, Diniz D, Affonso PRAM, Vicari MR (2020) Karyotypic diversification in two Megaleporinus species (Characiformes, Anostomidae) inferred from in situ localization of repetitive DNA sequences. Zebrafish 17:333–341. https://doi.org/10.1089/zeb.2020.1918

Article  CAS  PubMed  Google Scholar 

Ferretti AB, Milani D, Palacios-Gimenez OM, Ruiz-Ruano FJ, Cabral-de-Mello DC (2020) High dynamism for neo-sex chromosomes: satellite DNAs reveal complex evolution in a grasshopper. Heredity 125:124–137. https://doi.org/10.1038/s41437-020-0327-7

Article  CAS  PubMed  PubMed Central  Google Scholar 

Galetti PM Jr, Foresti F, Bertollo LAC, Moreira-Filho O (1981) Heteromorphic sex chromosomes in three species of the genus Leporinus (Pisces, Anostomidae). Cytogenet Cell Genet 29:138–142. https://doi.org/10.1159/000131562

Article  PubMed  Google Scholar 

Galetti PM Jr, Lima NRW, Venere PC (1995) A monophyletic ZW sex chromosome system in Leporinus (Anostomidae, Characiformes). Cytologia 60:375–382. https://doi.org/10.1508/cytologia.60.375

Article  Google Scholar 

Glugoski L, Nogaroto V, Deon GA, Azambuja M, Moreira-Filho O, Vicari MR (2022) Enriched tandemly repeats in chromosomal fusion points of Rineloricaria latirostris (Boulenger, 1900) (Siluriformes: Loricariidae). Genome 65:479–489. https://doi.org/10.1139/gen-2022-0043

Article  CAS  PubMed  Google Scholar 

Glugoski L, Deon GA, Nogaroto V, Moreira-Filho O, Vicari MR (2023) Robertsonian fusion site in Rineloricaria pentamaculata (Siluriformes: Loricariidae): involvement of 5S rDNA and satellite sequences. Cytogenet Genome Res 162:657–663. https://doi.org/10.1159/000530636

Article  Google Scholar 

Haerter CAG, Blanco DR, Traldi JB, Feldberg E, Margarido VP, Lui RL (2023) Are scattered microsatellites weak chromosomal markers? Guided mapping reveals new insights into Trachelyopterus (Siluriformes: Auchenipteridae) diversity. PLoS ONE 18:e0285388. https://doi.org/10.1371/journal.pone.0285388

Article  CAS  PubMed  PubMed Central  Google Scholar 

Ijdo JW, Wells RA, Baldini A, Reeders ST (1991) Improved telomere detection using a telomere repeat probe (TTAGGG)n generated by PCR. Nucleic Acids Res 19:4780. https://doi.org/10.1093/nar/19.17.4780

Article  CAS  PubMed  PubMed Central  Google Scholar 

Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, Cooper A, Markowitz S, Duran C, Thierer T, Ashton B, Meintjes P, Drummond A (2012) Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics 28:1647–1649. https://doi.org/10.1093/bioinformatics/bts199

Article  PubMed  PubMed Central  Google Scholar 

Kidwell MG (2002) Transposable elements and the evolution of genome size in eukaryotes. Genetica 115:49–63. https://doi.org/10.1023/A:1016072014259

Article  CAS  PubMed  Google Scholar 

Kohany O, Gentles AJ, Hankus L, Jurka J (2006) Annotation, submission and screening of repetitive elements in repbase: RepbaseSubmitter and Censor. BMC Bioinformatics 7:474. https://doi.org/10.1186/1471-2105-7-474

Article  CAS  PubMed  PubMed Central  Google Scholar 

Kratochvíl L, Stöck M, Rovatsos M, Bullejos M, Herpin A, Jeffries DL, Peichel CL, Perrin N, Valenzuela N, Pokorná MJ (2021) Expanding the classical paradigm: what we have learnt from vertebrates about sex chromosome evolution. Philos Trans R Soc Lond B Biol Sci 376:e20200097. https://doi.org/10.1098/rstb.2020.0097

Article  Google Scholar 

Levan A, Fredga K, Sandberg AA (1964) Nomenclature for centromeric position on chromosomes. Hereditas 52:201–220. https://doi.org/10.1111/j.1601-5223.1964.tb01953.x

Article  Google Scholar 

López-Flores I, Garrido-Ramos MA (2012) The repetitive DNA content of eukaryotic genomes. Genome Dyn 7:1–28. https://doi.org/10.1159/000337118

Article  PubMed  Google Scholar 

Lui RL, Blanco DR, Martinez JF, Margarido VP, Venere PC, Moreira-Filho O (2013) The role of chromosomal fusion in the karyotypic evolution of the genus Ageneiosus (Siluriformes: Auchenipteridae). Neotrop Ichthyol 11:327–334. https://doi.org/10.1590/S1679-62252013005000004

Article  Google Scholar 

Lui RL, Blanco DR, Traldi JB, Margarido VP, Moreira-Filho O (2015) Karyotypic variation of Glanidium ribeiroi Haseman, 1911 (Siluriformes, Auchenipteridae) along the Iguazu river basin. Braz J Biol 75:S215–S221. https://doi.org/10.1590/1519-6984.10714

Article  CAS  PubMed  Google Scholar 

Malimpensa GC, Traldi JB, Toyama D, Henrique-Silva F, Vicari MR, Moreira-Filho O (2018) Chromosomal mapping of repeat DNA in Bergiaria westermanni (Pimelodidae, Siluriformes): localization of 45S rDNA in B chromosomes. Cytogenet Genome Res 154:99–106. https://doi.org/10.1159/000487652

Article  CAS  PubMed  Google Scholar 

Marreta ME, Faldoni FLC, Parise-Maltempi PP (2012) Cytogenetic mapping of the W chromosome in the genus Leporinus (Teleostei, Anostomidae) using a highly repetitive DNA sequence. J Fish Biol 80:630–637. https://doi.org/10.1111/j.1095-8649.2011.03199.x

Article  CAS  PubMed  Google Scholar 

Meyne J, Baker RJ, Hobart HH, Hsu TC, Ryder OA, Ward OG, Wiley JE, Wurster-Hill DH, Yates TL, Moyzis RK (1990) Distribution of non-telomeric sites of the (TTAGGG)n telomeric sequence in vertebrate chromosomes. Chromosoma 99:3–10. https://doi.org/10.1007/BF01737283

Article  CAS  PubMed  Google Scholar 

Molina WF, Schmid M, Galetti PM Jr (1998) Heterochromatin and sex chromosomes in the neotropical fish genus Leporinus. Anostomidae) Cytobios 94:141–149. https://doi.org/10.1590/S1415-47572007000400010. Characiformes

Article  Google Scholar 

Nakayama I, Foresti F, Tewari R, Schartl M, Chourrout D (1994) Sex chromosome polymorphism and heterogametic males revealed by two cloned DNA probes in the ZW/ZZ fish Leporinus elongatus. Chromosoma 103:31–39. https://doi.org/10.1007/BF00364723

Article  CAS  PubMed  Google Scholar 

Oliveira MLM, Paim FG, Freitas ÉAS, Oliveira C, Foresti F (2021) Cytomolecular investigations using repetitive DNA probes contribute to the identification and characterization of Characidium sp. aff. C. Vidali (Teleostei: Characiformes). Neotrop Ichthyol 19:e200045. https://doi.org/10.1590/1982-0224-2020-0045

Article  Google Scholar 

Ozouf-Costaz C, Brandt J, Körting C, Pisano E, Bonillo C, Coutanceau J, Volff J (2004) Genome dynamics and chromosomal localization of the non-LTR retrotransposons Rex1 and Rex3 in Antarctic fish. Antarct Sci 16:51–57. https://doi.org/10.1017/S0954102004001816

Article  Google Scholar 

Paço A, Adega F, Meštrović N, Plohl M, Chaves R (2015) The puzzling character of repetitive DNA in Phodopus genomes (Cricetidae, Rodentia). Chromosome Res 23:427–440. https://doi.org/10.1007/s10577-015-9481-9

Article  CAS  PubMed  Google Scholar 

Parise-Maltempi PP, Martins C, Oliveira C, Foresti F (2007) Identification of a new repetitive element in the sex chromosomes of Leporinus elongatus (Teleostei: Characiformes: Anostomidae): new insights into the sex

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