Auld, SK, Hall, SR, Duffy, MA (2012) Epidemiology of a Daphnia-multiparasite system and its implications for the Red Queen. PLoS ONE 7:e39564.
Google Scholar | Crossref | Medline Baxter, M, Ray, DW (2020) Circadian rhythms in innate immunity and stress responses. Immunol 161:261–267.
Google Scholar | Crossref | Medline Bentkowski, P, Markowska, M, Pijanowska, J (2010) Role of melatonin in the control of depth distribution of Daphnia magna. Hydrobiologia 643:43–50.
Google Scholar | Crossref Bernatowicz, PP, Kotwica-Rolinska, J, Joachimiak, E, Sikora, A, Polanska, MA, Pijanowska, J, Bębas, P (2016) Temporal expression of the clock genes in the water flea Daphnia pulex (Crustacea: Cladocera). J Exp Zool A Ecol Genet Physiol 325:233–254.
Google Scholar | Crossref | Medline Biro, PA, Stamps, JA (2010) Do consistent individual differences in metabolic rate promote consistent individual differences in behavior? Trends Ecol Evol 25:653–659.
Google Scholar | Crossref | Medline Burg, JP (1972) The relationship between maximum entropy spectra and maximum likelihood spectra. Geophysics 37:375–376.
Google Scholar | Crossref | ISI Cellier-Michel, S, Rehaïlia, M, Berthon, JL (2003) Is the rhythm of vertical migration of Daphnia longispina circadian or simply nycthemeral? Ann Limnol 39:265–272.
Google Scholar | Crossref Clay, PA, Dhir, K, Rudolf, VH, Duffy, MA (2019) Within-host priority effects systematically alter pathogen coexistence. Am Nat 193:187–199.
Google Scholar | Crossref | Medline Coldsnow, KD, Relyea, RA, Hurley, JM (2017) Evolution to environmental contamination ablates the circadian clock of an aquatic sentinel species. Ecol Evol 23:10339–10349.
Google Scholar | Crossref Cooke, SL, Williamson, CE, Leech, DM, Boeing, WJ, Torres, L (2008) Effects of temperature and ultraviolet radiation on diel vertical migration of freshwater crustacean zooplankton. Can J of Fish Aquat Sci 65:1144–1152.
Google Scholar | Crossref Curtis, AM, Bellet, MM, Sassone-Corsi, P, O’Neill, LA (2014) Circadian clock proteins and immunity. Immunity 40:178–186.
Google Scholar | Crossref | Medline | ISI Dawidowicz, P, Loose, CJ (1992) Metabolic costs during predator-induced diel vertical migration of Daphnia. Limnol Oceanogr 37:1589–1595.
Google Scholar | Crossref Edwards, KD, Akman, OE, Knox, K, Lumsden, PJ, Thomson, AW, Brown, PE, Pokhilko, A, Kozma-Bognar, L, Nagy, F, Rand, DA, et al. (2010) Quantitative analysis of regulatory flexibility under changing environmental conditions. Mol Syst Biol 6:424.
Google Scholar | Crossref | Medline Foster, RG, Helfrich-Forster, C (2001) The regulation of circadian clocks by light in fruitflies and mice. Philos T R Soc B 356:1779–1789.
Google Scholar | Crossref | Medline | ISI Glaser, FT, Stanewsky, R (2005) Temperature synchronization of the Drosophila circadian clock. Curr Biol 15:1352–1363.
Google Scholar | Crossref | Medline | ISI Glaser, FT, Stanewsky, R (2007) Synchronization of the Drosophila circadian clock by temperature cycles. Cold Spring Harb Symp Quant Biol 72:233–242. doi:10.1101/sqb.2007.72.046.
Google Scholar | Crossref | Medline Gust, KA, Kennedy, AJ, Laird, JG, Wilbanks, MS, Barker, ND, Guan, X, Melby, NL, Burgoon, LD, Kjelland, ME, Swannack, TM (2019) Different as night and day: behavioural and life history responses to varied photoperiods in Daphnia magna. Mol Ecol 28:4422–4438.
Google Scholar | Crossref | Medline Haney, JF, Hall, DJ (1975) Diel vertical migration and filter-feeding activities of Daphnia. Arch Hydrobiol 75:413–441.
Google Scholar Hite, JL, Pfenning-Butterworth, AC, Vetter, RE, Cressler, CE (2020) A high-throughput method to quantify feeding rates in aquatic organisms: a case study with Daphnia. Ecol Evol 10:6239–6245.
Google Scholar | Crossref | Medline Kessler, K, Lampert, W (2004) Depth distribution of Daphnia in response to a deep-water algal maximum: the effect of body size and temperature gradient. Freshw Biol 49:392–401.
Google Scholar | Crossref Kilham, SS, Kreeger, DA, Lynn, SG, Goulden, CE, Herrera, L (1998) COMBO: a defined freshwater culture medium for algae and zooplankton. Hydrobiologia 377:147–159.
Google Scholar | Crossref Lahiri, K, Vallone, D, Gondi, SB, Santoriello, C, Dickmeis, T, Foulkes, NS (2005) Temperature regulates transcription in the zebrafish circadian clock. PLoS BIOL 3:e351.
Google Scholar | Crossref | Medline | ISI Lampert, W (2006) Daphnia: model herbivore, predator and prey. Pol J Ecol 54:607–620.
Google Scholar Leech, DM, Williamson, CE (2000) Is tolerance to UV radiation in zooplankton related to body size, taxon, or lake transparency? Ecol Appl 10:1530–1540.
Google Scholar | Crossref Levine, JD, Funes, P, Dowse, HB, Hall, JC (2002) Resetting the circadian clock by social experience in Drosophila melanogaster. Science 298(5600):2010–2012.
Google Scholar | Crossref | Medline | ISI Levine, JD (2004) Sharing time on the fly. Curr Opin Cell Biol 16(2):210–216.
Google Scholar | Crossref | Medline Makinol, W, Haruna, H, Ban, S (1996) Diel vertical migration and feeding rhythm of Daphnia longispina and Bosmina corexoni in Lake Toya, Hokkaido, Japan. Hydrobiologia 337:133–143.
Google Scholar McClung, CR (2006) Plant circadian rhythms. Plant Cell 18:792–803.
Google Scholar | Crossref | Medline | ISI R Core Team (2021) R: a language and environment for statistical computing. Vienna (Austria): R Foundation for Statistical Computing.
Google Scholar Ruby, NF (2003) Hibernation: when good clocks go cold. J Biol Rhythms 18:275–286.
Google Scholar | SAGE Journals | ISI Rund, SS, Yoo, B, Alam, C, Green, T, Stephens, MT, Zeng, E, George, GF, Sheppard, AD, Duffield, GE, Milenković, T, et al. (2016) Genome-wide profiling of 24 hr diel rhythmicity in the water flea, Daphnia pulex: network analysis reveals rhythmic gene expression and enhances functional gene annotation. BMC Genomics 17:1–20.
Google Scholar | Crossref | Medline Sarnelle, O, Wilson, AE (2008) Type III functional response in Daphnia. Ecology 89:1723–1732.
Google Scholar | Crossref | Medline Scheiermann, C, Kunisaki, Y, Frenette, PS (2013) Circadian control of the immune system. Nat Rev Immunol 13:190–198.
Google Scholar | Crossref | Medline | ISI Schwarzenberger, A, Wacker, A (2015) Melatonin synthesis follows a daily cycle in Daphnia. J Plankton Res 37:636–644.
Google Scholar | Crossref Schwarzenberger, A, Chen, L, Weiss, LC (2020) The expression of circadian clock genes in Daphnia magna diapause. Sci Rep 10:1–7.
Google Scholar | Crossref | Medline Schwarzenberger, A, Handke, NH, Romer, T, Wacker, A (2021) Geographic clines in Daphnia magna’s circadian clock gene expression: local adaptation to photoperiod. Zoology 144:125856.
Google Scholar | Crossref | Medline Seda, J, Petrusek, A (2011) Daphnia as a model organism in limnology and aquatic biology: introductory remarks. J Limnol 70:337–344.
Google Scholar | Crossref Shaw, JR, Pfrender, ME, Eads, BD, Klaper, R, Callaghan, A, Sibly, RM, Colson, I, Jansen, B, Gilbert, D, Colbourne, JK (2008) Daphnia as an emerging model for toxicological genomics. Adv Exp Biol 2:165–328.
Google Scholar | Crossref Shocket, MS, Vergara, D, Sickbert, AJ, Walsman, JM, Strauss, AT, Hite, JL, Duffy, MA, Cáceres, CE, Hall, SR (2018) Parasite rearing and infection temperatures jointly influence disease transmission and shape seasonality of epidemics. Ecology 99:1975–1987.
Google Scholar | Crossref | Medline Sorek, M, Levy, O (2012) The effect of temperature compensation on the circadian rhythmicity of photosynthesis in Symbiodinium, coral-symbiotic alga. Sci Rep 2:1–8.
Google Scholar | Crossref Stelzer, RJ, Stanewsky, R, Chittka, L (2010) Circadian foraging rhythms of bumblebees monitored by radio-frequency identification. J Bio Rhythms 25(4):257–267.
Google Scholar | SAGE Journals Wale, N, Duffy, MA (2021) The use and underuse of model systems in infectious disease ecology and evolutionary biology. Am Nat 198:69–92.
Google Scholar | Crossref | Medline Zielinski, T, Moore, AM, Troup, E, Halliday, KJ, Millar, AJ (2014) Strengths and limitations of period estimation methods for circadian data. PLoS ONE 9:e96462.
Google Scholar | Crossref