Background: Lung cancer is the leading cause of cancer-related deaths. Diagnosis at late stages is common due to the largely non-specific nature of presenting symptoms contributing to high mortality. There is a lack of specific, minimally invasive low-cost tests to screen patients ahead of the diagnostic biopsy. Patients and Methods: 344 symptomatic patients from the lung clinic of Lister hospital suspected of lung cancer were recruited. Predictive covariates were successfully generated on 170 patients from Computed Tomography (CT) scans using CT Texture Analysis (CTTA) and Deep Learning Autoencoders (DLA) as well as from peripheral blood data for immunity using high depth flow-cytometry and for exosome protein components. Predictive signatures were formed by combining covariates using Bayesian regression on a randomly chosen 128-patient training set and validated on a 42-patient held-out set. Final signatures were generated by fusing the data sources at different levels. Results: Immune and DLA were the best single modality signatures with test set AUCs of 0.76 (95% CI: 0.61 - 0.91) and 0.75 (95% CI: 0.60 - 0.90) respectively. The final combined signature had a ROC AUC of 0.86 (95% CI: 0.73 - 0.99) on the withheld test set. The overall sensitivity and specificity were 0.722 and 0.901 respectively. Conclusions: Combining immune monitoring with CT scan data is an effective approach to improving sensitivity and specificity of Lung cancer screening even in symptomatic patients.
Competing Interest StatementBG is the co-founder/co-inventor of TexRAD texture analysis software used in this study for CT Texture analysis and a shareholder (not an employee) of Feedback Plc., a UK-based company which owns the TexRAD texture analysis software. PB and TN are both currently employees of GlaxoSmithKline (GSK) but this study has not received any funding support from GSK. All remaining authors have declared no conflicts of interest.
Clinical Protocolshttps://clinicaltrials.gov/ct2/show/NCT04629079
Funding StatementThis work was funded by the CRUK grant [C1519/A27375]. SE, EC and JAS were further supported by core funding from the Wellcome Trust/EPSRC Centre for Medical Engineering [WT203148/Z/16/Z] and by the National Institute for Health and Care Research (NIHR) Clinical Research Facility at Guy's and St Thomas' NHS Foundation Trust. The views expressed are those of the author(s) and not necessarily those of the NHS, the NIHR or the Department of Health and Social Care. This work was undertaken at UCLH/UCL, which received a proportion of the funding from the UK's Department of Health's NIHR Biomedical Research Center's funding scheme.
Author DeclarationsI confirm all relevant ethical guidelines have been followed, and any necessary IRB and/or ethics committee approvals have been obtained.
Yes
The details of the IRB/oversight body that provided approval or exemption for the research described are given below:
Health Research Authority (HRA) of the UK NHS gave ethical approval for this work (REC reference: 19/EE/0357 20th Feb 2020).
I confirm that all necessary patient/participant consent has been obtained and the appropriate institutional forms have been archived, and that any patient/participant/sample identifiers included were not known to anyone (e.g., hospital staff, patients or participants themselves) outside the research group so cannot be used to identify individuals.
Yes
I understand that all clinical trials and any other prospective interventional studies must be registered with an ICMJE-approved registry, such as ClinicalTrials.gov. I confirm that any such study reported in the manuscript has been registered and the trial registration ID is provided (note: if posting a prospective study registered retrospectively, please provide a statement in the trial ID field explaining why the study was not registered in advance).
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I have followed all appropriate research reporting guidelines, such as any relevant EQUATOR Network research reporting checklist(s) and other pertinent material, if applicable.
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Data AvailabilityAll data produced in the present study are available upon reasonable request to the authors from the DIO: 10.18742/28070390
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