Large Language Model Symptom Identification from Clinical Text: A Multi-Center Study

Abstract

Recognition of patient symptoms is core to medicine, research, and public health. We tested four large language models (LLMs) identifying 11 symptoms of infectious respiratory diseases from emergency department notes (N=204). Each LLM outperformed ICD-10-based identification. GPT-4 had highest tested accuracy, F1 score 91.4% vs. 45.1% for ICD-10. GPT-4 performance in an independent validation cohort (N=308) was even higher with an F1 score of 94.0%.

Competing Interest Statement

The authors have declared no competing interest.

Funding Statement

Support for this study was provided by the Advanced Research Projects Agency for Health (ARPA-H) (75N95023D00001, 75N95023F00019), the National Center for Advancing Translational Sciences (NCATS), National Institutes of Health (U01TR002623), the Office of the National Coordinator for Health Information Technology (ONC) (90AX0031, 90C30007), and the the Centers for Disease Control and Prevention (CDC) of the US Department of Health and Human Services as part of a financial assistance award.

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I confirm all relevant ethical guidelines have been followed, and any necessary IRB and/or ethics committee approvals have been obtained.

Yes

The details of the IRB/oversight body that provided approval or exemption for the research described are given below:

The institutional review boards of Boston Children's Hospital and Indiana University gave ethical qpproval for this work.

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Yes

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