Bhagowati B, Ahamad KU (2018) A review on lake eutrophication dynamics and recent developments in lake modeling. Ecohydrol Hydrobiol 19(1):155–166. https://doi.org/10.1016/j.ecohyd.2018.03.002

Article  Google Scholar 

Mulder A, VandeGraaf AA, Robertson LA, Kuenen JG (1995) Anaerobic ammonium oxidation discovered in a denitrifying fluidized-bed reactor. FEMS Microbiol Ecol 16:177–184. https://doi.org/10.1016/0168-6496(94)00081-7

Article  CAS  Google Scholar 

Thamdrup B, Dalsgaard T (2002) Production of N2 through anaerobic ammonium oxidation coupled to nitrate reduction in marine sediments. Appl Environ Microbiol 68:1312–1318. https://doi.org/10.1128/AEM.68.3.1312-1318.2002

Article  CAS  PubMed  PubMed Central  Google Scholar 

Nie S, Li H, Yang XY, Zhang ZJ, Weng B, Huang FY, Zhu GB, Zhu YG (2015) Nitrogen loss by anaerobic oxidation of ammonium in rice rhizosphere. ISME J. https://doi.org/10.1038/ismej.2015.25

Article  PubMed  PubMed Central  Google Scholar 

Hua YM, Peng L, Zhang SH, Heal KV, Zhao JW, Zhu DW (2017) Effects of plants and temperature on nitrogen removal and microbiology in pilot-scale horizontal subsurface flow constructed wetlands treating domestic wastewater. Ecol Eng 108:70–77. https://doi.org/10.1016/j.ecoleng.2017.08.007

Article  Google Scholar 

Zheng YL, Jiang XF, Hou LJ, Liu M, Lin XB, Gao J, Li XF, Yin GY, Yu CD, Wang R (2016) Shifts in the community structure and activity of anaerobic ammonium oxidation bacteria along an estuarine salinity gradient. J Geophys Res Biogeosci. https://doi.org/10.1002/2015JG003300

Article  Google Scholar 

Bai R, Xi D, He JZ, Hu HW, Fang YT, Zhang LM (2015) Activity, abundance and community structure of anammox bacteria along depth profiles in three different paddy soils. Soil Biol Biochem 91:212–221. https://doi.org/10.1016/j.soilbio.2015.08.040

Article  CAS  Google Scholar 

Zhu GB, Wang SY, Wang C, Zhou LG, Zhao SY, Li YX, Li FB, Jetten MSM, Lu YL, Schwark L (2019) Resuscitation of anammox bacteria after > 10,000 years of dormancy. ISME J 13:1098–1109. https://doi.org/10.1038/s41396-018-0316-5

Article  CAS  PubMed  Google Scholar 

Lipsewers YA, Bale NJ, Hopmans EC, Schouten S, Sinninghe Damste JS, Villanueva L (2014) Seasonality and depth distribution of the abundance and activity of ammonia oxidizing microorganisms in marine coastal sediments (North Sea). Front Microbio 5:472. https://doi.org/10.3389/fmicb.2014.00472

Article  Google Scholar 

Humbert S, Tarnawski S, Fromin N, Mallet MP, Aragno M, Zopfi J (2010) Molecular detection of anammox bacteria in terrestrial ecosystems: distribution and diversity. ISME J 4:450–454. https://doi.org/10.1038/ismej.2009.125

Article  PubMed  Google Scholar 

Srivastava J, Gupta A, Chandra H (2008) Managing water quality with aquatic macrophytes. Rev Environ Sci Biotech 7:255–266. https://doi.org/10.1007/s11157-008-9135-x

Article  CAS  Google Scholar 

Dhote S, Dixit S (2009) Water quality improvement through macrophytes-a review. Environ Monit Assess 152:149–153. https://doi.org/10.1007/s10661-008-0303-9

Article  CAS  PubMed  Google Scholar 

Cui J, Zhao J, Wang Z, Cao WW, Zhang SH, Liu JM, Bao ZH (2020) Diversity of active root-associated methanotrophs of three emergent plants in a eutrophic wetland in northern China. AMB Expr 10:48. https://doi.org/10.1186/s13568-020-00984-x

Article  Google Scholar 

Zhao JW, Xu YF, Peng L, Liu GL, Wan XQ, Hua YM, Zhu DW, Hamilton DP (2019) Diversity of anammox bacteria and abundance of functional genes for nitrogen cycling in the rhizosphere of submerged macrophytes in a freshwater lake in summer. J Soil Sediments 19:3648–3656. https://doi.org/10.1007/s11368-019-02340-4

Article  CAS  Google Scholar 

Wang SY, Pi YX, Jiang YY, Pan HW, Wang XX, Wang XM, Zhou JM, Zhu GB (2019) Nitrate reduction in the reed rhizosphere of a riparian zone: from functional genes to activity and contribution. Environ Res. https://doi.org/10.1016/j.envres.2019.108867

Article  PubMed  PubMed Central  Google Scholar 

Duan XN, Wang XK, Mu YJ, Ouyang ZY (2005) Seasonal and diurnal variations in methane emissions from Wuliangsu Lake in arid regions of China. Atmos Environ 39:4479–4487. https://doi.org/10.1016/j.atmosenv.2005.03.045

Article  CAS  Google Scholar 

Vymazal J (2013) Emergent plants used in free water surface constructed wetlands: a review. Ecol Eng 61:582–592. https://doi.org/10.1016/j.ecoleng.2013.06.023

Article  Google Scholar 

Zhang SH, Cui J, Zhang M, Liu JM, Wang LX, Zhao J, Bao ZH (2021) Diversity of active anaerobic ammonium oxidation (ANAMMOX) and nirK-type denitrifying bacteria in macrophyte roots in a eutrophic wetland. J Soil Sediment 21:2465–2473. https://doi.org/10.1007/s11368-021-02926-x

Article  CAS  Google Scholar 

Paranychianakis NV, Tsiknia M, Kalogerakis N (2016) Pathways regulating the removal of nitrogen in planted and unplanted subsurface flow constructed wetlands. Water Res 102:321–329. https://doi.org/10.1016/j.watres.2016.06.048

Article  CAS  PubMed  Google Scholar 

Racchetti E, Longhi D, Ribaudo C, Soana E, Bartoli M (2017) Nitrogen uptake and coupled nitrification-denitrification in riverine sediments with benthic microalgae and rooted macrophytes. Aquat Sci 79:487–505. https://doi.org/10.1007/s00027-016-0512-1

Article  CAS  Google Scholar 

Zhou XH, Zhang JP, Li YM, Liu B, Chu JY, Wang MY, He ZL (2016) Distribution characteristics of ammonia oxidizing microorganisms in rhizosphere sediments of cattail. Ecol eng 88:99–111. https://doi.org/10.1016/j.ecoleng.2015.12.023

Article  Google Scholar 

Zhou XH, Zhang JP, Wen CZ (2017) Community composition and abundance of anammox bacteria in cattail rhizosphere sediments at three phenological stages. Curr Microbiolo 74:1349–1357. https://doi.org/10.1007/s00284-017-1324-9

Article  CAS  Google Scholar 

Su R, Huang R, Zeng J, Zhan DY, He RJ, Yu ZB, Wu QL (2021) Rhizosphere-associated nosZII microbial community of Phragmites australis and its influence on nitrous oxide emissions in two different regions. J Soils Sediments 21:3326–3341. https://doi.org/10.1007/s11368-021-02967-2

Article  CAS  Google Scholar 

Li H, Yang XR, Weng BS, Su JQ, Nie SA, Gilbert JA, Zhu YG (2016) The phenological stage of rice growth determines anaerobic ammonium oxidation activity in rhizosphere soil. Soil Biol Biochem 100:59–65. https://doi.org/10.1016/j.soilbio.2016.05.015

Article  CAS  Google Scholar 

Zhao DY, Luo J, Zeng J, Wang M, Yan WM, Huang R, Wu QL (2014) Effects of submerged macrophytes on the abundance and community composition of ammonia-oxidizing prokaryotes in a eutrophic lake. Environ Sci Pollut Res 21(1):389–398. https://doi.org/10.1007/s11356-013-1909-1

Article  Google Scholar 

He YL, Tao WD, Wang ZY, Shayya W (2012) Effects of pH and seasonal temperature variation on simultaneous partial nitrification and anammox in free-water surface wetlands. J Environ Manage 110:103–109. https://doi.org/10.1016/j.jenvman.2012.06.009

Article  CAS  PubMed  Google Scholar 

Sun HY, Lu XX, Yu RH, Yang J, Liu XY, Cao ZX, Zhang ZZ, Li MX (2021) Geng Y (2021) Eutrophication decreased CO2 but increased CH4 emissions from lake: a case study of a shallow Lake Ulansuhai. Water Res 201:117363. https://doi.org/10.1016/j.watres.2021.117363

Article  CAS  PubMed  Google Scholar 

Liu JM, Bao ZH, Cao WW, Han JJ, Zhao J, Kang ZZ, Wang LX, Zhao J (2020) Enrichment of type I methanotrophs with nirs genes of three emergent macrophytes in a eutrophic wetland in China. Microbes Environ. https://doi.org/10.1264/jsme2.me19098

Article  PubMed  PubMed Central  Google Scholar 

Kumar S, Stecher G, Tamura K (2016) MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets. Mol Biol Evol 33:1870–1874. https://doi.org/10.1093/molbev/msw054

Article  CAS  PubMed  PubMed Central  Google Scholar 

Luo Y, Yuan H, Zhao J, Qi Y, Cao WW, Liu JM, Guo W, Bao ZH (2021) Multiple factors influence bacterial community diversity and composition in soils with rare earth element and heavy metal co-contamination. Ecotox Environ Safe 225:112749. https://doi.org/10.1016/j.ecoenv.2021.112749

Article  CAS  Google Scholar 

Lange M, Eisenhauer N, Sierra CA, Bessler H, Engels C, Griffiths RI, Mellado-Vazquez PG, Malik AA, Roy J, Scheu S, Steinbeiss S, Thomson BC, Trumbore SE, Gleixner G (2015) Plant diversity increases soil microbial activity and soil carbon storage. Nat Commun 6:6707. https://doi.org/10.1038/ncomms7707

Article  CAS  PubMed  Google Scholar 

Bodelier PLE, Libochant JA, Blom CWPM, Laanbroek HJ (1996) Dynamics of nitrification and denitrification in root-oxygenated sediments and adaptation of ammonia-oxidizing bacteria to low-oxygen or anoxic habitat. Appl Environ Microbiol 62(11):4100–4107. https://doi.org/10.1016/S0027-5107(96)00126-1

Article  CAS  PubMed  PubMed Central  Google Scholar 

Ottosen LDM, Risgaard-Petersen N, Nielsen LP (1999) Direct and indirect measurements of nitrification and denitrification in the rhizosphere of aquatic macrophytes. Aquat Microb Ecol 19:81–91. https://doi.org/10.3354/ame019081

Article  Google Scholar 

Bais HP, Weir TL, Perry LG, Gilroy S, Vivanco JM (2006) The role of root exudates in rhizosphere interations with plants and other organisms. Annu Rev Plant Biol 57:233–266. https://doi.org/10.1146/annurev.arplant.57.032905.105159

Article  CAS  PubMed  Google Scholar 

Yin XJ, Lu J, Wang YC, Liu GL, Hua YM, Wan XQ, Zhao JW, Zhu DW (2020) The abundance of nirS-type denitrifiers and anammox bacteria in rhizospheres was affected by the organic acids secreted from roots of submerged macrophytes. Chemosphere 240:124903. https://doi.org/10.1016/j.chemosphere.2019.124903

Article  CAS  PubMed