A nontuberculous mycobacterium could solve the mystery of the lady from the Franciscan church in Basel, Switzerland

Hotz G, Augsburger M, Briellmann T, Bircher A, Castella V, Fiechter R, et al. Der rätselhafte Mumienfund aus der Barfüsserkirche in Basel. Ein aussergewöhnliches Beispiel interdisziplinärer Familienforschung. Jahrbuch der Schweizerischen Gesellschaft für Familienforschung. 2018;2018:1–30.

Google Scholar 

Hotz G, Opitz-Belakhal C. Anna Catharina Bischoff. Die Mumie aus der Barfüsserkirche. Basel: Christoph Merian Verlag; 2021.

Google Scholar 

Wurst C, Maixner F, Castella V, Cipollini G, Hotz G, Zink A. The lady from Basel’s Barfusserkirche - molecular confirmation of the mummy’s identity through mitochondrial DNA of living relatives spanning 22 generations. Forensic Sci Int Genet. 2022;56:102604.

Article  CAS  Google Scholar 

Briellmann T, Hotz G, Augsburger M, Lenglet S. Toxikologische Untersuchungen. In: Hotz G, Opitz-Belakhal C, editors. Anna Catharina Bischoff die Mumie aus der Barfüsserkirche (Rekonstruktion einer Basler Frauenbiografie des 18 Jahrhunderts). Basel: Christoph Merian Verlag; 2021.

Google Scholar 

Tampa M, Sarbu I, Matei C, Benea V, Georgescu SR. Brief history of syphilis. J Med Life. 2014;7(1):4–10.

CAS  Google Scholar 

Tzankov A, Bircher AJ. Mikroskopische Untersuchung. In: Hotz G, Opitz-Belakhal C, editors. Anna Catharina Bischoff die Mumie aus der Barfüsserkirche (Rekonstruktion einer Basler Frauenbiografie des 18 Jahrhunderts). Basel: Christoph Merian Verlag; 2021.

Google Scholar 

Njau DG, Muge E, Kinyanjui P, Omwandho C, Mukwana S. STR analysis of human DNA from maggots fed on decomposing bodies: assessment of the time period for successful analysis. Egypt J Forensic Sci. 2016;6(3):261–9.

Article  Google Scholar 

Sarhan MS, Lehmkuhl A, Straub R, Tett A, Wieland G, Francken M, et al. Ancient DNA diffuses from human bones to cave stones. iScience. 2021;24(12):103397.

Article  CAS  Google Scholar 

You M, Mo S, Leung WK, Watt RM. Comparative analysis of oral treponemes associated with periodontal health and disease. BMC Infect Dis. 2013;13(1):1–13.

Article  Google Scholar 

Verma D, Garg PK, Dubey AK. Insights into the human oral microbiome. Arch Microbiol. 2018;200(4):525–40.

Article  CAS  Google Scholar 

Huson DH, Beier S, Flade I, Gorska A, El-Hadidi M, Mitra S, et al. MEGAN Community edition - interactive exploration and analysis of large-scale microbiome sequencing data. PLoS Comput Biol. 2016;12(6):e1004957.

Article  Google Scholar 

Lu J, Rincon N, Wood DE, Breitwieser FP, Pockrandt C, Langmead B, et al. Metagenome analysis using the kraken software suite. Nat Protoc. 2022:17:2815–39.

Herbig A, Maixner F, Bos KI, Zink A, Krause J, Huson DH. MALT: fast alignment and analysis of metagenomic DNA sequence data applied to the Tyrolean iceman. bioRxiv. 2016:050559. https://www.biorxiv.org/content/10.1101/050559v1.

Jónsson H, Ginolhac A, Schubert M, Johnson P, Orlando L. mapDamage2.0: fast approximate Bayesian estimates of ancient DNA damage parameters. Bioinformatics. 2013;29(13):1682–4.

Article  Google Scholar 

Neukamm J, Peltzer A, Nieselt K. DamageProfiler: fast damage pattern calculation for ancient DNA. Bioinformatics. 2021. https://academic.oup.com/bioinformatics/article/37/20/3652/6247758.

Gupta RS, Lo B, Son J. Phylogenomics and comparative genomic studies robustly support division of the genus Mycobacterium into an emended genus Mycobacterium and four novel genera. Front Microbiol. 2018;9:67. https://doi.org/10.3389/fmicb.2018.00067.

Article  Google Scholar 

Meehan CJ, Barco RA, Loh Y-HE, Cogneau S, Rigouts L. Reconstituting the genus Mycobacterium. Int J Syst Evol Microbiol. 2021;71(9):004922.

Article  CAS  Google Scholar 

Ondov BD, Treangen TJ, Melsted P, Mallonee AB, Bergman NH, Koren S, et al. Mash: fast genome and metagenome distance estimation using MinHash. Genome Biol. 2016;17(1):1–14.

Article  Google Scholar 

Khan AA, Kim S-J, Paine DD, Cerniglia CE. Classification of a polycyclic aromatic hydrocarbon-metabolizing bacterium, Mycobacterium sp. strain PYR-1, as Mycobacterium vanbaalenii sp. nov. Int J Syst Evol Microbiol. 2002;52(6):1997–2002.

CAS  Google Scholar 

Stanford J, Gunthorpe W. A study of some fast-growing scotochromogenic mycobacteria including species descriptions of Mycobacterium gilvum (new species) and Mycobacterium duvalii (new species). Br J Exp Pathol. 1971;52(6):627.

CAS  Google Scholar 

Hennessee CT, Seo J-S, Alvarez AM, Li QX. Polycyclic aromatic hydrocarbon-degrading species isolated from Hawaiian soils: Mycobacterium crocinum sp. nov., Mycobacterium pallens sp. nov., Mycobacterium rutilum sp. nov., Mycobacterium rufum sp. nov. and Mycobacterium aromaticivorans sp. nov. Int J Syst Evol Microbiol. 2009;59(2):378–87.

Article  CAS  Google Scholar 

Cooksey RC, de Waard JH, Yakrus MA, Rivera I, Chopite M, Toney SR, et al. Mycobacterium cosmeticum sp. nov., a novel rapidly growing species isolated from a cosmetic infection and from a nail salon. Int J Syst Evol Microbiol. 2004;54(6):2385–91.

Article  CAS  Google Scholar 

Chamoiseau G. M. Farcinogenes agent causal du farcin du boeuf en Afrique. In: Annales de Microbiologie; 1973.

Google Scholar 

Toro A, Adekambi T, Cheynet F, Fournier P-E, Drancourt M. Mycobacterium setense infection in humans. Emerg Infect Dis. 2008;14(8):1330.

Article  Google Scholar 

Gomila M, Ramirez A, Gasco J, Lalucat J. Mycobacterium llatzerense sp. nov., a facultatively autotrophic, hydrogen-oxidizing bacterium isolated from haemodialysis water. Int J Syst Evol Microbiol. 2008;58(12):2769–73.

Article  CAS  Google Scholar 

Greninger AL, Langelier C, Cunningham G, Keh C, Melgar M, Chiu CY, et al. Two rapidly growing mycobacterial species isolated from a brain abscess: first whole-genome sequences of Mycobacterium immunogenum and Mycobacterium llatzerense. J Clin Microbiol. 2015;53(7):2374–7.

Article  CAS  Google Scholar 

Gcebe N, Michel A. Gey van Pittius NC, Rutten V: comparative genomics and proteomic analysis of four non-tuberculous Mycobacterium species and Mycobacterium tuberculosis complex: occurrence of shared immunogenic proteins. Front Microbiol. 2016;7:795.

Article  Google Scholar 

Schinsky MF, Morey RE, Steigerwalt AG, Douglas MP, Wilson RW, Floyd MM, et al. Taxonomic variation in the Mycobacterium fortuitum third biovariant complex: description of Mycobacterium boenickei sp. nov., Mycobacterium houstonense sp. nov., Mycobacterium neworleansense sp. nov. and Mycobacterium brisbanense sp. nov. and recognition of Mycobacterium porcinum from human clinical isolates. Int J Syst Evol Microbiol. 2004;54(5):1653–67.

Article  CAS  Google Scholar 

Okamori S, Asakura T, Nishimura T, Tamizu E, Ishii M, Yoshida M, et al. Natural history of Mycobacterium fortuitum pulmonary infection presenting with migratory infiltrates: a case report with microbiological analysis. BMC Infect Dis. 2018;18(1):1–6.

Article  Google Scholar 

Shojaei H, Goodfellow M, Magee J, Freeman R, Gould F, Brignall C. Mycobacterium novocastrense sp. nov., a rapidly growing photochromogenic mycobacterium. Int J Syst Evol Microbiol. 1997;47(4):1205–7.

CAS  Google Scholar 

Apajalahti JH, Kärpänoja P, Salkinoja-Salonen MS. Rhodococcus chlorophenolicus sp. nov., a chlorophenol-mineralizing actinomycete. Int J Syst Evol Microbiol. 1986;36(2):246–51.

CAS  Google Scholar 

Poh M-E, Liam C-K, Ng K-P, Tan R. Mycobacterium brisbanense species nova isolated from a patient with chronic cavitary lung infection. Chest. 2014;145(4):858–60.

Article  Google Scholar 

Franco MMJ, Paes AC, Ribeiro MG, de Figueiredo Pantoja JC, Santos ACB, Miyata M, et al. Occurrence of mycobacteria in bovine milk samples from both individual and collective bulk tanks at farms and informal markets in the southeast region of Sao Paulo, Brazil. BMC Vet Res. 2013;9(1):1–8.

Article  Google Scholar 

Shahraki AH, Çavuşoğlu C, Borroni E, Heidarieh P, Koksalan OK, Cabibbe AM, et al. Mycobacterium celeriflavum sp. nov., a rapidly growing scotochromogenic bacterium isolated from clinical specimens. Int J Syst Evol Microbiol. 2015;65(Pt_2):510–5.

Article  CAS  Google Scholar 

Heidarieh P, Shojaei H, Hashemi A, Feizabadi MM, Daei-Naser A, Ataei B. First report of isolation of Mycobacterium elephantis from bronchial lavage of a patient in Asia. JRSM Short Rep. 2011;2(4):1–3.

Article  Google Scholar 

Sethi S, Gupta V, Bhattacharyya S, Sharma M. Post-laparoscopic wound infection caused by scotochromogenic nontuberculous Mycobacterium. Jpn J Infect Dis. 2011;64(5):426–7.

Article  CAS  Google Scholar 

Allen DM, Chng HH. Disseminated Mycobacterium flavescens in a probable case of chronic granulomatous disease. J Inf Secur. 1993;26(1):83–6.

CAS  Google Scholar 

Brown-Elliott BA, Wallace RJ Jr, Petti CA, Mann LB, McGlasson M, Chihara S, et al. Mycobacterium neoaurum and Mycobacterium bacteremicum sp. nov. as causes of mycobacteremia. J Clin Microbiol. 2010;48(12):4377–85.

Article  Google Scholar 

Tsukamura M, Mizuno S, Gane N, Mills A, King L: Mycobacterium rhodesiae sp. nov. A new species of rapid-growing scotochromogenic mycobacteria. Japanese J Microbiol. 1971;15(5):407–16.

Article  CAS  Google Scholar 

Tortoli E, Kroppenstedt RM, Bartoloni A, Caroli G, Jan I, Pawlowski J, et al. Mycobacterium tusciae sp. nov. Int J Syst Evol Microbiol. 1999;49(4):1839–44.

Article  CAS  Google Scholar 

Jiménez MS, Campos-Herrero MI, García D, Luquin M, Herrera L, García MJ. Mycobacterium canariasense sp. nov. Int J Syst Evol Microbiol. 2004;54(5):1729–34.

Article  Google Scholar 

Shojaei H, Daley C, Gitti Z, Hashemi A, Heidarieh P, Moore ER, et al. Mycobacterium iranicum sp. nov., a rapidly growing scotochromogenic species isolated from clinical specimens on three different continents. Int J Syst Evol Microbiol. 2013;63(Pt_4):1383–9.

Article  CAS  Google Scholar 

Chen Y-C, Jou R, Huang W-L, Huang S-T, Liu K-C, Lay C-J, et al. Bacteremia caused by Mycobacterium wolinskyi. Emerg Infect Dis. 2008;14(11):1818.

Article  CAS  Google Scholar 

Adékambi T, Stein A, Carvajal J, Raoult D, Drancourt M. Description of Mycobacterium conceptionense sp. nov., a Mycobacterium fortuitum group organism isolated from a posttraumatic osteitis inflammation. J Clin Microbiol. 2006;44(4):1268–73.

Article  Google Scholar 

Kazda J. Mycobacterium sphagni sp. nov. Int J Syst Evol Microbiol. 1980;30(1):77–81.

CAS  Google Scholar 

Lee SA, Raad II, Adachi JA, Han XY. Catheter-related bloodstream infection caused by Mycobacterium brumae. J Clin Microbiol. 2004;42(11):5429–31.

Article  Google Scholar 

Dahl JL, Gatlin W III, Tran PM, Sheik CS. Mycolicibacterium nivoides sp. nov isolated from a peat bog. Int J Syst Evol Microbiol. 2021;71(3). https://www.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.004438.

Luis BAL, Díaz-Lomelí P, Gómez-Albarrán LP, Martínez-Gamboa A, Ponce-de-León A. Mycobacterium obuense bacteremia in a patient with pneumonia. Emerg Infect Dis. 2019;25(5):1015.

Article  Google Scholar 

Marie I, Heliot P, Roussel F, Herve F, Muir J, Levesque H. Fatal Mycobacterium peregrinum pneumonia in refractory polymyositis treated with infliximab. Rheumatology. 2005;44(9):1201–2.

Article  CAS  Google Scholar 

Adékambi T, Foucault C, La Scola B, Drancourt M. Report of two fatal cases of Mycobacterium mucogenicum central nervous system infection in immunocompetent patients. J Clin Microbiol. 2006;44(3):837–40.

Article 

留言 (0)

沒有登入
gif