Girard L, Lood C, Höfte M, Vandamme P, Rokni-Zadeh H, van Noort V, et al. The ever-expanding Pseudomonas genus: description of 43 new species and partition of the Pseudomonas putida group. Microorganisms. 2021;9:1766.

Article  CAS  Google Scholar 

Gross H, Loper JE. Genomics of secondary metabolite production by Pseudomonas spp. Nat Prod Rep. 2009;26:1408–46.

Article  CAS  Google Scholar 

Götze S, Stallforth P. Structure, properties, and biological functions of nonribosomal lipopeptides from pseudomonads. Nat Prod Rep. 2020;37:29–54.

Article  Google Scholar 

Geudens N, Martins JC. Cyclic lipodepsipeptides from Pseudomonas spp.—biological Swiss-army knives. Front Microbiol. 2018;9:1867.

Article  Google Scholar 

Albarano L, Esposito R, Ruocco N, Costantini M. Genome mining as new challenge in natural products discovery. Mar Drugs. 2020;18:199.

Article  CAS  Google Scholar 

Ma Z, Hu J. Complete genome sequence of a marine-sediment-derived bacterial strain Bacillus velezensis SH-B74, a cyclic lipopeptides producer and a biopesticide. 3 Biotech. 2019;9:162.

Article  Google Scholar 

Meier-Kolthoff JP, Göker M. TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy. Nat Commun. 2019;10:2182.

Article  Google Scholar 

Blin K, Shaw S, Kloosterman AM, Charlop-Powers Z, van Wezel GP, Medema Marnix H, et al. antiSMASH 6.0: improving cluster detection and comparison capabilities. Nucleic Acids Res. 2021;49:W29–35.

Article  CAS  Google Scholar 

Nguyen DD, Melnik A, Koyama N, Lu X, Schorn M, Fang J, et al. Indexing the Pseudomonas specialized metabolome enabled the discovery of poaeamide B and the bananamides. Nat Microbiol. 2017;2:16197.

Article  Google Scholar 

Omoboye OO, Geudens N, Duban M, Chevalier M, Flahaut C, Martins JC, et al. Pseudomonas sp. COW3 produces new bananamide-type cyclic lipopeptides with antimicrobial activity against Pythium myriotylum and Pyricularia oryzae. Molecules 2019;24:4170.

Article  CAS  Google Scholar 

Zarvandi S, Bahrami T, Pauwels B, Asgharzadeh A, Hosseini-Mazinani M, Salari F, et al. Draft genome sequence of cyclic lipopeptide producer Pseudomonas sp. strain SWRI103, isolated from wheat rhizosphere. Microbiol Resour Announc. 2020;9:e00538–20.

Article  CAS  Google Scholar 

Girard L, Geudens N, Pauwels B, Höfte M, Martins JC, De Mot R. Transporter gene-mediated typing for detection and genome mining of lipopeptide-producing Pseudomonas. Applied. Environ Microbiol. 2021;88:e0186921.

Article  Google Scholar 

Sambrooke J, Fritsch EF, Maniatis T, editors. Molecular Cloning: A Laboratory Manual. 2nd ed. Cold Spring Harbor: Cold Spring Harbor Laboratory Press;1989.

King EO, Ward MK, Raney DE. Two simple media for the demonstration of pyocyanin and fluorescin. J Lab Clin Med. 1954;44:301–7.

CAS  Google Scholar 

Vijayasarathy S, Prasad P, Fremlin LJ, Ratnayake R, Salim AA, Khalil Z, et al. C3 and 2D C3 Marfey’s methods for amino acid analysis in natural products. J Nat Prod. 2016;79:421–7.

Article  CAS  Google Scholar 

De Roo V, Verleysen Y, Kovács B, De Vleeschouwer M, Muangkaew P, Girard L, et al. An nuclear magnetic resonance fingerprint matching approach for the identification and structural re-evaluation of Pseudomonas Lipopeptides. Microbiol Spectr. 2022;10:e0126122.

Article  Google Scholar 

Cautain B, de Pedro N, Schulz C, Pascual J, da S, Sousa T, Martin J, et al. Identification of the lipodepsipeptide MDN-0066, a novel inhibitor of VHL/HIF pathway produced by a new Pseudomonas species. PLoS ONE. 2015;10:e0125221.

Article  Google Scholar 

Ma Z, Wang N, Hu J, Wang S. Isolation and characterization of a new iturinic lipopeptide, mojavensin A produced by a marine-derived bacterium Bacillus mojavensis B0621A. J Antibiot (Tokyo). 2012;65:317–22.

Article  CAS  Google Scholar 

Ma Z, Zhang S, Zhang S, Wu G, Shao Y, Mi Q, et al. Isolation and characterization of a new cyclic lipopeptide surfactin from a marine-derived Bacillus velezensis SH-B74. J Antibiot (Tokyo). 2020;73:863–7.

Article  CAS  Google Scholar