The Illumina sequencing data of K. pneumoniae isolate FS was deposited in NCBI under accession number SAMN12045482. The Pacbio sequencing data of the K. pneumoniae isolate GZ-1 was deposited in NCBI under accession number SAMN09925542. Nanopore sequencing data of K. pneumoniae isolates XH1507 and XH1508 were deposited in NCBI under accession numbers CP092793 to CP092800 and CP092786 to CP092792, respectively. The sequence assemblies of 331 ST11-KL64 CRKP isolates from 28 tertiary hospitals in China in 2018 have been deposited in the NCBI database (accession no. PRJNA832474).

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