Wild-type and cancer-prone zebrafish exhibit distinct gut microbial diversity and differential anti-inflammatory response upon infection

Backhed F, Ley RE, Sonnenburg JL, et al. 2005 Host-bacterial mutualism in the human intestine. Science 307 1915–1920

Article  PubMed  Google Scholar 

Bej AK, Patterson DP, Brasher CW, et al. 1999 Detection of total and hemolysin-producing Vibrio parahaemolyticus in shellfish using multiplex PCR amplification of tl, tdh and trh. J. Microbiol. Methods 36 215–225

Article  CAS  PubMed  Google Scholar 

Belkaid Y and Hand TW 2014 Role of the microbiota in immunity and inflammation. Cell 157 121–141

Article  CAS  PubMed  PubMed Central  Google Scholar 

Berghmans S, Murphey RD, Wienholds E, et al. 2005 TP53 mutant zebrafish develop malignant peripheral nerve sheath tumors. Proc. Natl. Acad. Sci. USA 102 407–412

Article  CAS  PubMed  PubMed Central  Google Scholar 

Brugman S 2016 The zebrafish as a model to study intestinal inflammation. Dev. Comp. Immunol. 64 82–92

Article  CAS  PubMed  Google Scholar 

Cabello FC 2006 Heavy use of prophylactic antibiotics in aquaculture: A growing problem for human and animal health and for the environment. Environ. Microbiol. 8 1137–1144

Article  CAS  PubMed  Google Scholar 

Cani PD 2018 Human gut microbiome: Hopes, threats and promises. Gut 67 1716–1725

Article  CAS  PubMed  Google Scholar 

Cascón A, Anguita J, Hernanz C, et al. 1996 Identification of Aeromonas hydrophila hybridization group 1 by PCR assays. Appl. Environ. Microbiol. 62 1167–1170

Article  PubMed  PubMed Central  Google Scholar 

Cebra JJ 1999 Influences of microbiota on intestinal immune system development. Am. J. Clin. Nutr. 69 1046s–1051s

Article  CAS  PubMed  Google Scholar 

Clemente JC, Ursell LK, Parfrey LW and Knight R 2012 The impact of the gut microbiota on human health: An integrative view. Cell 148 1258–1270

Article  CAS  PubMed  PubMed Central  Google Scholar 

De Souza HS and Fiocchi C 2016 Immunopathogenesis of IBD: Current state of the art. Nat. Rev. Gastroenterol. Hepatol. 13 13–27

Article  PubMed  Google Scholar 

Gopalakrishnan V, Helmink BA, Spencer CN, Reuben A and Wargo JA 2018 The influence of the gut microbiome on cancer, immunity, and cancer immunotherapy Cancer Cell 33 570–580

Holmes E, Li JV, Athanasiou T, Ashrafian H and Nicholson JK 2011 Understanding the role of gut microbiome–host metabolic signal disruption in health and disease. Trends Microbiol. 19 349–359

Article  CAS  PubMed  Google Scholar 

Hooper LV, Littman DR and Macpherson AJ 2012 Interactions between the microbiota and the immune system. Science 336 1268–1273

Article  CAS  PubMed  PubMed Central  Google Scholar 

Johnson LR and Christensen J 1987 Physiology of the gastrointestinal tract (Raven Press)

Kim YB, Okuda J, Matsumoto C, et al. 1999 Identification of Vibrio parahaemolyticus strains at the species level by PCR targeted to the toxR gene. J. Clin. Microbiol. 37 1173–1177

Article  CAS  PubMed  PubMed Central  Google Scholar 

Koch WH, Payne WL, Wentz BA and Cebula TA 1993 Rapid polymerase chain reaction method for detection of Vibrio cholerae in foods. Appl. Environ. Microbiol. 59 556–560

Article  CAS  PubMed  PubMed Central  Google Scholar 

Lee JG, Lee S, Jeon J, et al. 2022 Host tp53 mutation induces gut dysbiosis eliciting inflammation through disturbed sialic acid metabolism. Microbiome 10 3

Lupp C, Robertson ML, Wickham ME, et al. 2007 Host-mediated inflammation disrupts the intestinal microbiota and promotes the overgrowth of Enterobacteriaceae. Cell Host Microbe 2 119–129

Article  CAS  PubMed  Google Scholar 

Logan SL, Thomas J, Yan J, et al. 2018 The Vibrio cholerae type VI secretion system can modulate host intestinal mechanics to displace gut bacterial symbionts. Proc. Natl. Acad. Sci. USA 115 E3779–E3787

Article  CAS  PubMed  PubMed Central  Google Scholar 

Mahenthiralingam E, Bischof J, Byrne SK, et al. 2000 DNA-based diagnostic approaches for identification of Burkholderia cepacia complex, Burkholderia vietnamiensis, Burkholderia multivorans, Burkholderia stabilis, and Burkholderia cepacia genomovars I and III. J. Clin. Microbiol. 38 3165–3173

Maiti B, Raghunath P, Karunasagar I and Karunasagar I 2009 Cloning and expression of an outer membrane protein OmpW of Aeromonas hydrophila and study of its distribution in Aeromonas spp. J. Appl. Microbiol. 107 1157–1167

Article  CAS  PubMed  Google Scholar 

Martineau F, Picard FJ, Ke D, et al. 2001 Development of a PCR assay for identification of staphylococci at genus and species levels. J. Clin. Microbiol. 39 2541–2547

McGarr SE, Ridlon JM and Hylemon PB 2005 Diet anaerobic bacterial metabolism, and colon cancer: A review of the literature. J. Clin. Gastroenterol. 39 98–109

PubMed  Google Scholar 

O’Hara AM and Shanahan F 2006 The gut flora as a forgotten organ. EMBO Rep. 7 688–693

Article  CAS  PubMed  PubMed Central  Google Scholar 

Rosado D, Xavier R, Severino R, et al. 2019 Effects of disease, antibiotic treatment and recovery trajectory on the microbiome of farmed seabass (Dicentrarchus labrax). Sci. Rep. 9 18946

Article  CAS  PubMed  PubMed Central  Google Scholar 

Routy B, Gopalakrishnan V, Daillère R, et al. 2018 The gut microbiota influences anticancer immunosurveillance and general health. Nat. Rev. Clin. Oncol. 15 382–396

Article  CAS  PubMed  Google Scholar 

Ruzicka L, Howe DG, Ramachandran S, et al. 2019 The zebrafish information network: New support for non-coding genes, richer gene ontology annotations and the alliance of genome resources. Nucleic Acids Res. 47 D867–D873

Article  CAS  PubMed  Google Scholar 

Shi N, Li N, Duan X and Niu H 2017 Interaction between the gut microbiome and mucosal immune system. Mil. Med. Res. 4 14

PubMed  PubMed Central  Google Scholar 

Shreiner AB, Kao JY and Young VB 2015 The gut microbiome in health and in disease. Curr. Opin. Gastroenterol. 31 69

Article  CAS  PubMed  PubMed Central  Google Scholar 

Sivan A, Corrales L, Hubert N, et al. 2015 Commensal Bifidobacterium promotes antitumor immunity and facilitates anti-PD-L1 efficacy. Science 350 1084–1089

Article  CAS  PubMed  PubMed Central  Google Scholar 

Uehara I and Tanaka N 2018 Role of p53 in the regulation of the inflammatory tumor microenvironment and tumor suppression. Cancers 10 219

Article  PubMed Central  Google Scholar 

Xin G-Y, Li W-G, Suman TY, et al. 2020 Gut bacteria Vibrio sp. and Aeromonas sp. trigger the expression levels of proinflammatory cytokine: First evidence from the germ-free zebrafish. Fish Shellfish Immunol. 106 518–525

Article  CAS  PubMed  Google Scholar 

Xu J and Gordon JI 2003 Honor thy symbionts Proc. Natl. Acad. Sci. USA 100 10452–10459

Article  CAS  Google Scholar 

Zoetendal EG, Collier CT, Koike S, Mackie RI and Gaskins HR 2004 Molecular ecological analysis of the gastrointestinal microbiota: A review. J. Nutr. 134 465–472

Article  CAS  PubMed  Google Scholar 

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