Al-Hashimi A, Venugopalan V, Sereesongsaeng N, Tedelind S, Pinzaru AM, Hein Z et al (2020) Significance of nuclear cathepsin V in normal thyroid epithelial and carcinoma cells. Biochim Biophys Acta Mol Cell Res 1867(12):118846
Bian W, Jiang XX, Wang Z, Zhu YR, Zhang H, Li X et al (2021) Comprehensive analysis of the ceRNA network in coronary artery disease. Sci Rep 11(1):1–11
Brito JP, Morris JC, Montori VM (2013)Thyroid cancer: zealous imaging has increased detection and treatment of low risk tumours. Bmj 347
Cai Y, Wan J (2018) Competing endogenous RNA regulations in neurodegenerative disorders: current challenges and emerging insights. Front Mol Neurosci 11:370
CAS PubMed PubMed Central Google Scholar
Chin CH, Chen SH, Wu HH, Ho CW, Ko MT, Lin CY (2014) cytoHubba: identifying hub objects and sub-networks from complex interactome. BMC Syst Biol 8(Supp 4):S11
PubMed PubMed Central Google Scholar
Dong M, Xie Y, Xu Y (2019) miR-7-5p regulates the proliferation and migration of colorectal cancer cells by negatively regulating the expression of Krüppel-like factor 4. Oncol Lett 17(3):3241–3246
CAS PubMed PubMed Central Google Scholar
Esteller M (2011) Non-coding RNAs in human disease. Nat Rev Genet 12(12):861–74
Expansion of the Gene (2017) Ontology knowledgebase and resources. Nucleic Acids Res 45(D1):D331–D338
Feinberg AP, Ohlsson R, Henikoff S (2006) The epigenetic progenitor origin of human cancer. Nat rev genet 7(1):21–33
Goel MK, Khanna P, Kishore J (2010) Understanding survival analysis: kaplan-meier estimate. Int J Ayurveda Res 1(4):274
PubMed PubMed Central Google Scholar
Gray RJ (2002) Modeling survival data: extending the cox model. J Am Stat Assoc 97(457):353–4. https://doi.org/10.1198/jasa.2002.s447
Grillone K, Riillo C, Scionti F, Rocca R, Tradigo G, Guzzi PH et al (2020) Non-coding RNAs in cancer: platforms and strategies for investigating the genomic dark matter. J Exp Clin Cancer Res 39(1):117
CAS PubMed PubMed Central Google Scholar
Guo K, Qian K, Shi Y, Sun T, Wang Z (2021) LncRNA-MIAT promotes thyroid cancer progression and function as ceRNA to target EZH2 by sponging miR-150-5p. Cell Death Dis 12(12):1–12
He Z, Deng W, Jiang B, Liu S, Tang M, Liu Y et al (2018) Hsa-let-7b inhibits cell proliferation by targeting PLK1 in HCC. Gene 673:46–55. https://doi.org/10.1016/j.gene.2018.06.047
CAS Article PubMed Google Scholar
Huang Q, Zhou Y, Li Y, Liao Z (2020) GGCT promotes colorectal cancer migration and invasion via epithelial-mesenchymal transition. Oncol Lett 20(2):1063–70
CAS PubMed PubMed Central Google Scholar
Huang HY, Lin YCD, Li J, Huang KY, Shrestha S, Hong HC et al (2020) miRTarBase 2020: updates to the experimentally validated microRNA-target interaction database. Nucleic Acids Res 48(D1):D148–D154
Hui L, Zheng F, Bo Y, Sen-Lin M, Ai-Jun L, Wei-Ping Z et al (2020) MicroRNA let-7b inhibits cell proliferation via upregulation of p21 in hepatocellular carcinoma. Cell Biosci 10(1):83
CAS PubMed PubMed Central Google Scholar
Jeggari A, Marks DS, Larsson E (2012) miRcode: a map of putative microRNA target sites in the long non-coding transcriptome. Bioinformatics 28(15):2062–2063
CAS PubMed PubMed Central Google Scholar
Jiang MC, Ni JJ, Cui WY, Wang BY, Zhuo W (2019) Emerging roles of lncRNA in cancer and therapeutic opportunities. Am J Cancer Res 9(7):1354
CAS PubMed PubMed Central Google Scholar
Kanehisa M, Furumichi M, Tanabe M, Sato Y, Morishima K (2017) KEGG: new perspectives on genomes, pathways, diseases and drugs. Nucleic Acids Res 45(D1):D353-61
Kang H, Rho JG, Kim C, Tak H, Lee H, Ji E et al (2017) The miR-24-3p/p130Cas: a novel axis regulating the migration and invasion of cancer cells. Sci Rep 7:44847
CAS PubMed PubMed Central Google Scholar
Kawasaki K, Nojima S, Hijiki S, Tahara S, Ohshima K, Matsui T et al (2020) FAM111B enhances proliferation of KRAS-driven lung adenocarcinoma by degrading p16. Cancer Sci. 111(7):2635–46
CAS PubMed PubMed Central Google Scholar
Khella HWZ, Bakhet M, Allo G, Jewett MAS, Girgis AH, Latif A et al (2013) miR-192, miR-194 and miR-215: a convergent microRNA network suppressing tumor progression in renal cell carcinoma. Carcinogenesis 34(10):2231–2239. https://doi.org/10.1093/carcin/bgt184
CAS Article PubMed Google Scholar
Kilfoy BA, Zheng T, Holford TR, Han X, Ward MH, Sjodin A et al (2009) International patterns and trends in thyroid cancer incidence, 1973–2002. Cancer causes control 20(5):525–31
Law CW, Chen Y, Shi W, Smyth GK (2014) voom: precision weights unlock linear model analysis tools for RNA-seq read counts. Genome Biol. 15(2):R29. https://doi.org/10.1186/gb-2014-15-2-r29
CAS Article PubMed PubMed Central Google Scholar
Li L, Kang L, Zhao W, Feng Y, Liu W, Wang T et al (2017) miR-30a-5p suppresses breast tumor growth and metastasis through inhibition of LDHA-mediated warburg effect. Cancer Lett 400:89–98. https://doi.org/10.1016/j.canlet.2017.04.034
CAS Article PubMed Google Scholar
Li R, Qu H, Wang S, Wei J, Zhang L, Ma R et al (2018) GDCRNATools: an R/Bioconductor package for integrative analysis of lncRNA, miRNA and mRNA data in GDC. Bioinformatics 34(14):2515–7
Liu X, Liu G, Lu Y, Shi Y (2020) Long non-coding RNA HOTAIR promotes cell viability, migration and invasion in thyroid cancer by sponging miR-17-5p. Neoplasma 67(2):229–37
Lu NH, Wei CY, Qi FZ, Gu JY (2020) Hsa-let-7b suppresses cell proliferation by targeting UHRF1 in melanoma. Cancer Invest 38(1):52–60
Nagaiah G, Hossain A, Mooney CJ, Parmentier J, Remick SC (2011) Anaplastic thyroid cancer: a review of epidemiology, pathogenesis, and treatment. J Oncol
Paci P, Colombo T, Farina L (2014) Computational analysis identifies a sponge interaction network between long non-coding RNAs and messenger RNAs in human breast cancer. BMC Syst Biol 8(1):83
PubMed PubMed Central Google Scholar
Park CS, Kim SH, Jung SL, Kang BJ, Kim JY, Choi JJ et al (2010) Observer variability in the sonographic evaluation of thyroid nodules. J Clin Ultrasound 38(6):287–93
Peng X, Zhang K, Ma L, Xu J, Chang W (2020) The role of long non-coding RNAs in thyroid cancer. Front Oncol 10:941
PubMed PubMed Central Google Scholar
Quinn JJ, Chang HY (2016) Unique features of long non-coding RNA biogenesis and function. Nat Rev Genet 17(1):47–62
Ramírez-Moya J, Wert-Lamas L, Acuña-Ruíz A, Fletcher A, Wert-Carvajal C, McCabe CJ et al (2022) Identification of an interactome network between lncRNAs and miRNAs in thyroid cancer reveals SPTY2D1-AS1 as a new tumor suppressor. Sci Rep 12(1):1–13
Robinson MD, Oshlack A (2010) A scaling normalization method for differential expression analysis of RNA-seq data. Genome Biol 11(3):R25. https://doi.org/10.1186/gb-2010-11-3-r25
CAS Article PubMed PubMed Central Google Scholar
Robinson MD, McCarthy DJ, Smyth GK (2010) edgeR: a Bioconductor package for differential expression analysis of digital gene expression data. Bioinformatics 26(1):139–140
Salmena L, Poliseno L, Tay Y, Kats L, Pandolfi PP (2011) A ceRNA hypothesis: the Rosetta Stone of a hidden RNA language? Cell 146(3):353–8
CAS PubMed PubMed Central Google Scholar
Schriml LM, Mitraka E, Munro J, Tauber B, Schor M, Nickle L et al (2019) Human Disease Ontology 2018 update: classification, content and workflow expansion. Nucleic Acids Res. 47(D1):D955–D962
See A, Iyer NG, Tan NC, Teo C, Ng J, Soo KC et al (2017) Distant metastasis as the sole initial manifestation of well-differentiated thyroid carcinoma. Europ Arch Oto-Rhino-Laryngol 274(7):2877–82
Seib CD, Sosa JA (2019) Evolving understanding of the epidemiology of thyroid cancer. Endocrinology and Metabolism Clinics. 48(1):23–35
Seo D, Kim D, Chae Y, Kim W.( 2020) The ceRNA network of lncRNA and miRNA in lung cancer. Genomics Informa 18(4)
Shannon P, Markiel A, Ozier O, Baliga NS, Wang JT, Ramage D et al (2003) Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res. 13(11):2498–504
CAS PubMed PubMed Central Google Scholar
Su K, Wang N, Shao Q, Liu H, Zhao B, Ma S (2021) The role of a ceRNA regulatory network based on lncRNA MALAT1 site in cancer progression. Biomed Pharmacother 137:111389
Sun H, Liu K, Huang J, Sun Q, Shao C, Luo J et al (2019) FAM111B, a direct target of p53, promotes the malignant process of lung adenocarcinoma. Onco Targets Ther 12:2829
CAS PubMed PubMed Central Google Scholar
Sung H, Ferlay J, Siegel RL, Laversanne M, Soerjomataram I, Jemal A et al (2021) Global cancer statistics 2020: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries. CA Cancer J Clin. 71(3):209–49
Tam AA, Ozdemir D, Aydı
留言 (0)