Markowitz, J. E. et al. The striatum organizes 3D behavior via moment-to-moment action selection. Cell 174, 44–58.e17 (2018).
Zhang, Y. et al. Fast and sensitive GCaMP calcium indicators for imaging neural populations. Preprint at bioRxiv https://doi.org/10.1101/2021.11.08.467793 (2021).
Giovannucci, A. et al. CaImAn an open source tool for scalable calcium imaging data analysis. eLife 8, e38173 (2019).
Parker, J. G. et al. Diametric neural ensemble dynamics in parkinsonian and dyskinetic states. Nature 557, 177–182 (2018).
Pnevmatikakis, E. A. et al. Simultaneous denoising, deconvolution, and demixing of calcium imaging data. Neuron 89, 285–299 (2016).
Kawaguchi, Y., Wilson, C. J. & Emson, P. C. Projection subtypes of rat neostriatal matrix cells revealed by intracellular injection of biocytin. J. Neurosci. 10, 3421–3438 (1990).
Preston, R. J., Bishop, G. A. & Kitai, S. T. Medium spiny neuron projection from the rat striatum: an intracellular horseradish peroxidase study. Brain Res 183, 253–263 (1980).
Inan, H. et al. Fast and statistically robust cell extraction from large-scale neural calcium imaging datasets. Preprint at bioRxiv https://doi.org/10.1101/2021.03.24.436279 (2021).
Zhou, P. et al. Efficient and accurate extraction of in vivo calcium signals from microendoscopic video data. eLife 7, e28728 (2018).
Mukamel, E. A., Nimmerjahn, A. & Schnitzer, M. J. Automated analysis of cellular signals from large-scale calcium imaging data. Neuron 63, 747–760 (2009).
Rehani, R. et al. Activity patterns in the neuropil of striatal cholinergic interneurons in freely moving mice represent their collective spiking dynamics. eNeuro 6, ENEURO.0351-18.2018 (2019).
London, T. D. et al. Coordinated ramping of dorsal striatal pathways preceding food approach and consumption. J. Neurosci. 38, 3547–3558 (2018).
Chang, C.-J. et al. Behavioral clusters revealed by end-to-end decoding from microendoscopic imaging. Preprint at bioRxiv https://doi.org/10.1101/2021.04.15.440055 (2021).
Trautmann, E. M. et al. Dendritic calcium signals in rhesus macaque motor cortex drive an optical brain-computer interface. Nat. Commun. 12, 3689 (2021).
Keemink, S. W. et al. FISSA: a neuropil decontamination toolbox for calcium imaging signals. Sci. Rep. 8, 3493 (2018).
Chen, Y. et al. Soma-targeted imaging of neural circuits by ribosome tethering. Neuron 107, 454–469.e6 (2020).
Shemesh, O. A. et al. Precision calcium imaging of dense neural populations via a cell-body-targeted calcium indicator. Neuron 107, 470–486.e11 (2020).
Menegas, W., Babayan, B. M., Uchida, N. & Watabe-Uchida, M. Opposite initialization to novel cues in dopamine signaling in ventral and posterior striatum in mice. eLife 6, e21886 (2017).
Shindou, T., Shindou, M., Watanabe, S. & Wickens, J. A silent eligibility trace enables dopamine‐dependent synaptic plasticity for reinforcement learning in the mouse striatum. Eur. J. Neurosci. 49, 726–736 (2019).
Yamaguchi, K. et al. A behavioural correlate of the synaptic eligibility trace in the nucleus accumbens. Sci. Rep. 12, 1921 (2022).
Schindelin, J. et al. Fiji: an open-source platform for biological-image analysis. Nat. Methods 9, 676–682 (2012).
Pnevmatikakis, E. A. & Giovannucci, A. NoRMCorre: an online algorithm for piecewise rigid motion correction of calcium imaging data. J. Neurosci. Methods 291, 83–94 (2017).
Matikainen-Ankney, B. A. et al. An open-source device for measuring food intake and operant behavior in rodent home-cages. eLife 10, e66173 (2021).
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