Lexical Stability of Psychiatric Clinical Notes from Electronic Health Records over a Decade

Abstract

Natural Language Processing methods hold promise for improving clinical prediction by utilising information otherwise hidden in the clinical notes of electronic health records. However, clinical practice-as well as the systems and databases in which clinical notes are recorded and stored-change over time. As a consequence, the content of clinical notes may also change over time, which could degrade the performance of prediction models. Despite its importance, the stability of clinical notes over time has rarely been tested. Therefore, in this study, we examined the lexical stability of clinical notes from the Psychiatric Services of the Central Denmark Region in the period from January 1, 2011, to November 22, 2021 (a total of 14,811,551 clinical notes describing 129,570 patients) by quantifying sentence length, readability, syntactic complexity and clinical content - and estimating changepoints in these metrics. We find lexical and syntactic stability over time, which bodes well for the use of Natural Language Processing for predictive modelling in clinical practice.

Competing Interest Statement

Danielsen has received a speaker honorarium from Otsuka Pharmaceutical. SDØ received the 2020 Lundbeck Foundation Young Investigator Prize. Furthermore, SDØ owns/has owned units of mutual funds with stock tickers DKIGI, IAIMWC and WEKAFKI, and has owned units of exchange-traded funds with stock tickers BATE, TRET, QDV5, QDVH, QDVE, SADM, IQQH, USPY, EXH2, 2B76 and EUNL. The remaining authors declare no conflicts of interest.

Funding Statement

The study is supported by grants from the Lundbeck Foundation (grant number: R344-2020- 1073), the Danish Cancer Society (grant number: R283-A16461), the Central Denmark Region Fund for Strengthening of Health Science (grant number: 1-36-72-4-20) and the Danish Agency for Digitisation Investment Fund for New Technologies (grant number 2020- 6720) to Østergaard, who reports further funding from the Lundbeck Foundation (grant number: R358-2020-2341), the Novo Nordisk Foundation (grant number: NNF20SA0062874) and Independent Research Fund Denmark (grant number: 7016-00048B). The funders played no role in the study design, collection, analysis or interpretation of data, the writing of the report or the decision to submit the paper for publication.

Author Declarations

I confirm all relevant ethical guidelines have been followed, and any necessary IRB and/or ethics committee approvals have been obtained.

Yes

The details of the IRB/oversight body that provided approval or exemption for the research described are given below:

The Central Denmark Region Legal office gave permission to use electronic heatlh records. According to the Danish Committee Act, ethical review board approval is not required for studies based solely on data from electronic health records (waiver for this project: 1-10-72-1-22).

I confirm that all necessary patient/participant consent has been obtained and the appropriate institutional forms have been archived, and that any patient/participant/sample identifiers included were not known to anyone (e.g., hospital staff, patients or participants themselves) outside the research group so cannot be used to identify individuals.

Yes

I understand that all clinical trials and any other prospective interventional studies must be registered with an ICMJE-approved registry, such as ClinicalTrials.gov. I confirm that any such study reported in the manuscript has been registered and the trial registration ID is provided (note: if posting a prospective study registered retrospectively, please provide a statement in the trial ID field explaining why the study was not registered in advance).

Yes

I have followed all appropriate research reporting guidelines and uploaded the relevant EQUATOR Network research reporting checklist(s) and other pertinent material as supplementary files, if applicable.

Yes

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