Yong D, et al. Characterization of a new metallo-β-lactamase gene, blaNDM-1, and a novel erythromycin esterase gene carried on a unique genetic structure in Klebsiella pneumoniae sequence type 14 from India. Antimicrob Agents Ch. 2009;53:5046–54.

CAS  Article  Google Scholar 

Acman M, et al. Role of mobile genetic elements in the global dissemination of the carbapenem resistance gene blaNDM. Nat Commun. 2022;13:1131.

CAS  Article  Google Scholar 

Razavi M, Kristiansson E, Flach C-F, Larsson DGJ. The association between insertion sequences and antibiotic resistance genes. Msphere. 2020;5:e00418–20.

CAS  Article  Google Scholar 

Bourque G, et al. Ten things you should know about transposable elements. Genome Biol. 2018;19:199.

CAS  Article  Google Scholar 

Partridge SR, Kwong SM, Firth N, Jensen SO. Mobile genetic elements associated with antimicrobial resistance. Clin Microbiol Rev. 2018;31:e00088–17.

Hernández-Allés S, et al. Development of resistance during antimicrobial therapy caused by insertion sequence interruption of porin genes. Antimicrob Agents Ch. 1999;43:937–9.

Article  Google Scholar 

Toleman MA, Bennett PM, Walsh TR. ISCR elements: novel gene-capturing systems of the 21st century? Microbiol Mol Biol Rev Mmbr. 2006;70:296–316.

CAS  Article  Google Scholar 

Lallement C, Pasternak C, Ploy M-C, Jové T. The role of ISCR1-borne POUT promoters in the expression of antibiotic resistance genes. Front Microbiol. 2018;9:2579.

Article  Google Scholar 

Partridge SR, Iredell JR. Genetic contexts of blaNDM-1. Antimicrob Agents Ch. 2012;56:6065–7.

CAS  Article  Google Scholar 

Shen W, Le S, Li Y, Hu F. SeqKit: a cross-platform and ultrafast toolkit for FASTA/Q file manipulation. Plos One. 2016;11:e0163962.

Article  Google Scholar 

Ishikawa J, Hotta K. FramePlot: a new implementation of the frame analysis for predicting protein-coding regions in bacterial DNA with a high G+C content. Fems Microbiol Lett. 1999;174:251–3.

CAS  Article  Google Scholar 

Clinical and Laboratory Standards Institute. Performance Standards for Antimicrobial Susceptibility Testing (30th Edition), Clinical and Laboratory Standards Institute, Wayne, PA. M100-ED30 (2020)

Moser A, et al. A patient with multiple carbapenemase producers including an unusual Citrobacter sedlakii hosting an IncC blaNDM-1- and armA-carrying plasmid. Pathogens. Immun. 2021;6:119–34.

Google Scholar 

Shen P, et al. Detection of an Escherichia coli sequence type 167 strain with two tandem copies of blaNDM-1 in the chromosome. J Clin Microbiol. 2017;55:199–205.

CAS  Article  Google Scholar 

Luo X, et al. Chromosomal integration of huge and complex blaNDM-carrying genetic elements in Enterobacteriaceae. Front Cell Infect Mi. 2021;11:690799.

CAS  Article  Google Scholar 

Wozniak RAF, et al. Comparative ICE genomics: insights into the evolution of the SXT/R391 family of ICEs. Plos Genet. 2009;5:e1000786.

Article  Google Scholar 

Sakamoto N, et al. Genomic characterization of carbapenemase-producing Klebsiella pneumoniae with chromosomally carried blaNDM-1. Antimicrob Agents Ch. 2018;62:e01520–18.

Varani A, He S, Siguier P, Ross K, Chandler M. The IS6 family, a clinically important group of insertion sequences including IS26. Mob DNA. 2021;12:11.

CAS  Article  Google Scholar 

Ryan MP, Armshaw P, Pembroke JT. SXT/R391 integrative and conjugative elements (ICEs) encode a novel ‘Trap-Door’ strategy for mobile element escape. Front Microbiol. 2016;7:829.

PubMed  PubMed Central  Google Scholar 

Kuduvalli PN, Rao JE, Craig NL. Target DNA structure plays a critical role in Tn7 transposition. EMBO J. 2001;20:924–32.

CAS  Article  Google Scholar