Mizuo H. Jomon pottery. Jpn Q. 1967;14:326.
Habu J. Ancient Jomon of Japan. 4. Cambridge: Cambridge University Press; 2004.
Nasu H, Momohara A. The beginnings of rice and millet agriculture in prehistoric Japan. Quat Int. 2016;397:504–12.
Hudson MJ, Nakagome S, Whitman JB. The evolving Japanese: the dual structure hypothesis at 30. Evol Hum Sci. 2020;2:e6.
Article PubMed PubMed Central Google Scholar
Hanihara K. Dual structure model for the population history of the Japanese. Jpn Rev. 1991;2:1–33.
Adachi N, Shinoda KI, Umetsu K, Kitano T, Matsumura H, Fujiyama R, et al. Mitochondrial DNA analysis of Hokkaido Jomon skeletons: remnants of archaic maternal lineages at the southwestern edge of former Beringia. Am J Phys Anthropol. 2011;146:346–60.
Kanzawa-Kiriyama H, Saso A, Suwa G, Saitou N. Ancient mitochondrial DNA sequences of Jomon teeth samples from Sanganji, Tohoku district, Japan. Anthropol Sci. 2013;121:89–103.
Mizuno F, Taniguchi Y, Kondo O, Hayashi M, Kurosaki K, Ueda S. Diversity in matrilineages among the Jomon individuals of Japan. Ann Hum Biol. 2023;50:324–31.
Tajima A, Hayami M, Tokunaga K, Juji T, Matsuo M, Marzuki S, et al. Genetic origins of the Ainu inferred from combined DNA analyses of maternal and paternal lineages. J Hum Genet. 2004;49:187–93.
Article PubMed CAS Google Scholar
Hammer MF, Chamberlain VF, Kearney VF, Stover D, Zhang G, Karafet T, et al. Population structure of Y chromosome SNP haplogroups in the United States and forensic implications for constructing Y chromosome STR databases. Forensic Sci Int. 2006;164:45–55.
Article PubMed CAS Google Scholar
Watanabe Y, Naka I, Khor SS, Sawai H, Hiomi Y, Tokunaga K, et al. Analysis of whole Y-chromosome sequences reveals the Japanese population history in the Jomon period. Sci Rep. 2019;9:8556.
Article PubMed PubMed Central Google Scholar
Jinam TA, Hong LC, Phipps ME, Stoneking M, Ameen M, Edo J, et al. Evolutionary history of continental Southeast Asians:“Early train” hypothesis based on genetic analysis of mitochondrial and autosomal DNA data. Mol Biol Evol. 2012;29:3513–27.
Article PubMed CAS Google Scholar
Nakagome S, Sato T, Ishida H, Hanihara T, Yamaguchi T, Kimura R, et al. Model-based verification of hypotheses on the origin of modern Japanese revisited by Bayesian inference based on genome-wide SNP data. Mol Biol Evol. 2015;32:1533–43.
Article PubMed CAS Google Scholar
Matsukusa H, Oota H, Haneji K, Toma T, Kawamura S, Ishida H. A genetic analysis of the Sakishima islanders reveals no relationship with Taiwan aborigines but shared ancestry with Ainu and main‐island Japanese. Am J Phys Anthropol. 2010;142:211–23.
Jinam T, Nishida N, Hirai M, Kawamura S, Oota H, Umetsu K, et al. The history of human populations in the Japanese Archipelago inferred from genome-wide SNP data with a special reference to the Ainu and the Ryukyuan populations. J Hum Genet. 2012;1:9.
Koganebuchi K, Katsumura T, Nakagome S, Ishida H, Kawamura S, Oota H. Autosomal and Y-chromosomal STR markers reveal a close relationship between Hokkaido Ainu and Ryukyu islanders. Anthropol Sci. 2012;120:199–208.
Yamaguchi-Kabata Y, Nakazono K, Takahashi A, Saito S, Hosono N, Kubo M, et al. Japanese population structure, based on SNP genotypes from 7003 individuals compared to other ethnic groups: effects on population-based association studies. Am J Hum Genet. 2008;83:445–56.
Article PubMed PubMed Central CAS Google Scholar
Takeuchi F, Katsuya T, Kimura R, Nabika T, Isomura M, Ohkubo T, et al. The fine-scale genetic structure and evolution of the Japanese population. PloS One. 2017;12:e0185487.
Article PubMed PubMed Central Google Scholar
Jinam T, Kawai Y, Kamatani Y, Sonoda S, Makisumi K, Sameshima H, et al. Genome-wide SNP data of Izumo and Makurazaki populations support inner-dual structure model for origin of Yamato people. J Hum Genet. 2021;66:681–7.
Article PubMed PubMed Central CAS Google Scholar
Watanabe Y, Isshiki M, Ohashi J. Prefecture-level population structure of the Japanese based on SNP genotypes of 11,069 individuals. J Hum Genet. 2021;66:431–7.
Article PubMed CAS Google Scholar
Watanabe Y, Ohashi J. Modern Japanese ancestry-derived variants reveal the formation process of the current Japanese regional gradations. iScience. 2023;26:106130.
Article PubMed PubMed Central CAS Google Scholar
Kanzawa-Kiriyama H, Kryukov K, Jinam TA, Hosomichi K, Saso A, Suwa G, et al. A partial nuclear genome of the Jomons who lived 3000 years ago in Fukushima, Japan. J Hum Genet. 2017;62:213–21.
Article PubMed CAS Google Scholar
Kanzawa-Kiriyama H, Jinam TA, Kawai Y, Sato T, Hosomichi K, Tajima A, et al. Late Jomon male and female genome sequences from the Funadomari site in Hokkaido, Japan. Anthropol Sci. 2019;127:83–108.
Gakuhari T, Nakagome S, Rasmussen S, Allentoft ME, Sato T, Korneliussen T, et al. Ancient Jomon genome sequence analysis sheds light on migration patterns of early East Asian populations. Commun Biol. 2020;3:437.
Article PubMed PubMed Central Google Scholar
Cooke NP, Mattiangeli V, Cassidy LM, Okazaki K, Stokes CA, Onbe S, et al. Ancient genomics reveals tripartite origins of Japanese populations. Sci Adv. 2021;7:eabh2419.
Article PubMed PubMed Central CAS Google Scholar
Shinoda KI, Kanzawa-Kiriyama H, Kakuda T, Adachi N. Genetic characteristics of Yayoi people in northwestern Kyushu: ancient genome analysis of human bones excavated from Shimomotoyama rock shelter, Sasebo, Nagasaki prefecture, Japan. Anthropol Sci (Jpn Ser). 2019;127:25–43.
Saiki K, Wakebe T, Nagashima S. Cranial nonmetrical analyses of the Yayoi people in the northwestern Kyushu area. Anthropol Sci. 2000;108:27–44.
Watanabe T, Saiki K, Okamoto K, Wakebe T. Metrical and nonmetrical analyses of modern female crania in the northwestern Kyushu area. Anthropol Sci. 2004;112:147–59.
Naito Y. On the human skeletons of Yayoi period excavated at the sites in north-western Kyushu. J Anthropol Soc Nippon (Jpn Ser). 1971;79:236–48. in Japanese
Naito Y Human skeletal remains of the Yayoi period. In: Ogata T, editor. Jinruigaku-koza, The Japanese I. 1981; 5. Tokyo: Yuzankaku shuppan; p. 57–99 (in Japanese).
Naito Y. The transition from the Jomon to the Yayoi skeletons in Kyushu. The Anthropological Society of Nippon (ed.). Tokyo: Nikkei-Science; 1984. p. 52–9. Jinruigakuin Japanese
Kanaseki T The question of the Yayoi people. In: Sugihara S, editor. Nippon Koukogaku Koza, Yayoi Culture. Tokyo: Kawade shobou; 1956; 4. p. 238–52 (in Japanese).
Kanaseki T The physical characteristic of Japanese in the Yayoi-period. In: Proceedings of 15th General Assembly, 1959; Japan Medical Congress. 1: p. 167–74 (in Japanese).
Kanaseki T The Yayoi people. In: Wajima S, editor, Nippon no Kokogaku: Yayoi Period. Tokyo: Kawade shobou; 1966; 3. p. 460–71 (in Japanese).
Lienkaemper JJ, Ramsey CB. OxCal: Versatile tool for developing paleoearthquake chronologies—A primer. Seismol Res Lett. 2009;80:431–4.
Reimer PJ, Austin WE, Bard E, Bayliss A, Blackwell PG, Ramsey CB, et al. The IntCal20 Northern Hemisphere radiocarbon age calibration curve (0–55 cal kBP). Radiocarbon. 2020;62:725–57.
Mizuno F, Gojobori J, Kumagai M, Baba H, Taniguchi Y, Kondo O, et al. Population dynamics in the Japanese Archipelago since the Pleistocene revealed by the complete mitochondrial genome sequences. Sci Rep. 2021;11:12018.
Article PubMed PubMed Central CAS Google Scholar
Kihana M, Mizuno F, Sawafuji R, Wang L, Ueda S. Emulsion PCR-coupled target enrichment: an effective fishing method for high-throughput sequencing of poorly preserved ancient DNA. Gene. 2013;528:347–51.
Article PubMed CAS Google Scholar
Mizuno F, Taniguchi Y, Kondo O, Hayashi M, Kurosaki K, Ueda S. A study of 8,300-year-old Jomon human remains in Japan using complete mitogenome sequences obtained by next-generation sequencing. Ann Hum Biol. 2020;47:555–9.
Jónsson H, Ginolhac A, Schubert M, Johnson PL, Orlando L. mapDamage2. 0: fast approximate Bayesian estimates of ancient DNA damage parameters. Bioinformatics. 2013;29:1682–4.
留言 (0)