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Expression profiles of lncRNAs, miRNAs, and mRNAs and interaction analysis indicates their potential involvment during testicular fusion in Spodoptera litura
Expression profiles of lncRNAs, miRNAs, and mRNAs and interaction analysis indicates their potential involvment during testicular fusion in Spodoptera litura
KeywordsTesticular fusionNon-coding RNAscAMP signal pathwayECM remodelingInducible metalloproteinase inhibitor protein (IM...
Using two self-developed InDel panels to explore forensic feature and population genetic structure in the Hui group
Using two self-developed InDel panels to explore forensic feature and population genetic structure in the Hui group
To address the challenges faced by forensic examiners in degraded DNA analysis, we have developed two different panels for...
RNA-Seq profiling of circular RNAs in mice with lipopolysaccharide-induced acute lung injury
RNA-Seq profiling of circular RNAs in mice with lipopolysaccharide-induced acute lung injury
KeywordsHigh-throughput RNA sequencingAcute lung injuryCircular RNAscircRNA-miRNA-mRNA networkCompeting endogenous RNAAbbr...
Whole genome sequencing of Crassostrea ariakensis (Mollusca: Ostreidae) and C. hongkongensis expands understandings of stress resistance in sessile oysters
Whole genome sequencing of Crassostrea ariakensis (Mollusca: Ostreidae) and C. hongkongensis expands understandings of stress resistance in sessile oysters
To understand the environmental adaptations among sessile bivalves lacking adaptive immunity, a series of analyses were co...
Sex-specific transcriptome of the chicken chorioallantoic membrane
Sex-specific transcriptome of the chicken chorioallantoic membrane
Dimorphism between male and female embryos has been demonstrated in many animal species, including chicken species. Likewi...
Transcriptomic and metabolomic analyses reveal that lemon extract prolongs Drosophila lifespan by affecting metabolism
Transcriptomic and metabolomic analyses reveal that lemon extract prolongs Drosophila lifespan by affecting metabolism
Ageing is an evolutionarily conserved and irreversible biological process in different species. Numerous studies have repo...
LncRNA FIRRE regulated endometrial cancer radiotherapy sensitivity via the miR-199b-5p/SIRT1/BECN1 axis-mediated autophagy
LncRNA FIRRE regulated endometrial cancer radiotherapy sensitivity via the miR-199b-5p/SIRT1/BECN1 axis-mediated autophagy
BackgroundEndometrial cancer (EC) poses a serious threat to women's health. Radiotherapy has been widely used for EC treat...
MetaAc4C: A multi-module deep learning framework for accurate prediction of N4-acetylcytidine sites based on pre-trained bidirectional encoder representation and generative adversarial networks
MetaAc4C: A multi-module deep learning framework for accurate prediction of N4-acetylcytidine sites based on pre-trained bidirectional encoder representation and generative adversarial networks
MotivationN4-acetylcytidine (ac4C) is a highly conserved RNA modification that plays a crucial role in various biological ...
Multi-omics network analysis on samples from sequential biopsies reveals vital role of proliferation arrest for Macrosteatosis related graft failure in rats after liver transplantation
Multi-omics network analysis on samples from sequential biopsies reveals vital role of proliferation arrest for Macrosteatosis related graft failure in rats after liver transplantation
DEGsdifferentially expressed genesDEMsdifferentially expressed metabolitesEdU5-Ethynyl-2′-deoxyuridineIRIischemia/reperfus...
Molecular basis of genetic improvement for key rice quality traits in Southern China
Molecular basis of genetic improvement for key rice quality traits in Southern China
Grain qualities including milling quality, appearance quality, eating and cooking quality, and nutritional quality are imp...
De novo transcriptional analysis of the response to starvation stress in the white ridgetail prawn, Exopalaemon carinicauda
De novo transcriptional analysis of the response to starvation stress in the white ridgetail prawn, Exopalaemon carinicauda
To study the mechanism of the biomolecular response in Exopalaemon carinicauda to starvation stress, we subjected muscle t...
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops
The P. magellanicus genome assembly and annotation data have been deposited in FigShare (https://doi.org/10.6084/m9.figsha...
Resistome, mobilome, virulome analysis and phylogenomics of Enterococcus faecalis isolated from raw muscle foods of beef origin in Gauteng, South Africa
Resistome, mobilome, virulome analysis and phylogenomics of Enterococcus faecalis isolated from raw muscle foods of beef origin in Gauteng, South Africa
Enterococcus faecalis is a ubiquitous bacterium found in various environments, including processed beef meat, and is known...
ER-β accelerates the process of primary osteoporosis by promoting VEGFA-mediated apoptosis of osteoblasts
ER-β accelerates the process of primary osteoporosis by promoting VEGFA-mediated apoptosis of osteoblasts
Primary osteoporosis (POP) is a widespread and severe disorder of bone metabolism characterized by reduced bone mass and d...
Deep sequencing reveals recurrent somatic mutations and distinct molecular subgroups in gastric cancer in Mizo population, North East India
Deep sequencing reveals recurrent somatic mutations and distinct molecular subgroups in gastric cancer in Mizo population, North East India
KeywordsGastric cancerTP53Chromatin-remodeling geneRTK/RAS/PI3-K signaling pathwayEBVMSIAbbreviationsMSIMicrosatellite Ins...
Duodenal–Jejunal bypass improves metabolism and re-models extra cellular matrix through modulating ceRNA network
Duodenal–Jejunal bypass improves metabolism and re-models extra cellular matrix through modulating ceRNA network
KeywordsDuodenal–jejunal bypassAdipose tissueceRNA networkMetabolism improvementECM remodelingData availabilityThe materia...
Genomics evolution of Jingmen viruses associated with ticks and vertebrates
Genomics evolution of Jingmen viruses associated with ticks and vertebrates
Jingmen virus (JMV) associated with ticks and vertebrates have been found to be related to human disease. We obtained the ...
Chromosome-level genome assembly of Bactrocera correcta provides insights into its adaptation and invasion mechanisms
Chromosome-level genome assembly of Bactrocera correcta provides insights into its adaptation and invasion mechanisms
Bactrocera correcta is an invasive polyphagous pest with significant ecological and economic implications. Understanding i...
Mitophagy and mitochondrion-related expression profiles in response to physiological and pathological hypoxia in the corneal epithelium
Mitophagy and mitochondrion-related expression profiles in response to physiological and pathological hypoxia in the corneal epithelium
To study the mitochondrial and cellular responses to physiological and pathological hypoxia, corneal epithelial cells were...
Mesenchymal stem cell-regulated miRNA-mRNA landscape in acute-on-chronic liver failure
Mesenchymal stem cell-regulated miRNA-mRNA landscape in acute-on-chronic liver failure
KeywordsAcute-on-chronic liver failureACLFMesenchymal stem cellMSCmiRNATranscriptomicsmiRNA-mRNA networkImmune cell subset...
Nasal responses to elevated temperature and Francisella noatunensis infection in Atlantic cod (Gadus morhua)
Nasal responses to elevated temperature and Francisella noatunensis infection in Atlantic cod (Gadus morhua)
We report the histological and transcriptomic changes in the olfactory organ of Atlantic cod exposed to Francisella noatun...
Comprehensive assembly and comparative examination of the full mitochondrial genome in Castanea mollissima Blume
Comprehensive assembly and comparative examination of the full mitochondrial genome in Castanea mollissima Blume
The Chinese chestnut, Castanea mollissima Blume, a nut-bearing tree native to China and North Korea, belongs to the Fagace...
Liver transcriptomic and proteomic analyses provide new insight into the pathogenesis of liver fibrosis in mice
Liver transcriptomic and proteomic analyses provide new insight into the pathogenesis of liver fibrosis in mice
KeywordsLiver fibrosisTranscriptomicsProteomicsIntegrative analysisData independent acquisitionData availabilityAll RNA-Se...
Identification and verification of novel ferroptosis biomarkers predicts the prognosis of hepatocellular carcinoma
Identification and verification of novel ferroptosis biomarkers predicts the prognosis of hepatocellular carcinoma
Background: Big data mining and experiments are widely used to mine new prognostic markers. Methods: Candidate genes were ...
Comprehensive analysis of cuproptosis genes and cuproptosis-related genes as prognosis factors in esophageal squamous cell carcinoma
Comprehensive analysis of cuproptosis genes and cuproptosis-related genes as prognosis factors in esophageal squamous cell carcinoma
Esophageal squamous cell carcinoma (ESCC) is a common invasive and pernicious cancer with a low five-year survival rate. T...
Deficiency of ligase IV leads to reduced NHEJ, accumulation of DNA damage, and can sensitize cells to cancer therapeutics
Deficiency of ligase IV leads to reduced NHEJ, accumulation of DNA damage, and can sensitize cells to cancer therapeutics
Ligase IV is a key enzyme involved during DNA double-strand breaks (DSBs) repair through nonhomologous end joining (NHEJ)....
RIOK3 potentially regulates osteogenesis-related pathways in ankylosing spondylitis and the differentiation of bone marrow mesenchymal stem cells
RIOK3 potentially regulates osteogenesis-related pathways in ankylosing spondylitis and the differentiation of bone marrow mesenchymal stem cells
RNA-binding proteins (RBPs), which are key effectors of gene expression, play critical roles in inflammation and immune re...
Comprehensive transcriptome and WGCNA analysis reveals the potential function of anthocyanins in low-temperature resistance of a red flower mutant tobacco
Comprehensive transcriptome and WGCNA analysis reveals the potential function of anthocyanins in low-temperature resistance of a red flower mutant tobacco
Available online 17 October 2023, 110728Author links open overlay panel, , , , , , , , , Highlights•Tobacco with different...
Chromosome-level genome assembly and population genomic analysis provide novel insights into the immunity and evolution of Sogatella furcifera
Chromosome-level genome assembly and population genomic analysis provide novel insights into the immunity and evolution of Sogatella furcifera
KeywordsSogatella furciferaChromosome-level genome assemblyComparative genomicsPopulation genomicsImmunity and evolutionDa...
Dynamic alterations of the transcriptome-wide m6A methylome in cytogenetically normal acute myeloid leukaemia during initial diagnosis and relapse
Dynamic alterations of the transcriptome-wide m6A methylome in cytogenetically normal acute myeloid leukaemia during initial diagnosis and relapse
Accumulating studies have indicated that N6-methyladenosine (m6A) plays an important role in acute myeloid leukaemia (AML)...
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